LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral1576g00128	ATGGTCATCTTAAGACTGGGCAACACCCGCAAGGAGAAGGAAGAAGGAATGAGGCTTGCCAATTACGAAATCGGCACAACTCTGGGCAGTGGCAGCTTCGGAAAGGTGAAATTGGCCAAACACATCGATTCTCATAAACTCTTTGCCCTCAAGATCATCGACAAGACCAAGATCATTCACCTCAATATCGCTCATCAGATAAAGAGGGAGATAGCCACCCTCAAGCTTCTGAAGCATCCCAACGTCGTCAGATTACACGAGGTTTTAGCTAGCAAAACGAACATTTACATGGTCTTGGAGTACGTTGCTGGAGGAGAGTTGTTTGACAGAATTGCATCCAAAGGTAGGCTTAAAGAAGCTGAAGGCAGGAAGCTTTTCCAACAGTTAATTGATGGTGTGAGCTACTGTCACAATAAAGGTGTCTTCCACAGGGATCTTAAGCTGGAGAATGTACTGGTGGATGCCCAAGGCAACATAAAGATAACCGATTTTGGCCTCAGTGCTTTGCCCCAGCACATTAGGGCCGATGGGTTGCTGCACACAACCTGCGGAAGTCCCAGCTATGTTGCTCCCGAGGTCCTTGCTAATAGAGGCTATGAAGGTGCAACATCAGATACATGGTCATGTGGTATTATCTTGTTTGTAATTCTAACGGGATATCTTCCTTTTGAAGATCGGAACATGGCCGTTCTCTATCAAAAGATATCCAAAGGAGATGTCCGGATACCAAAATGGCTATCACCTGGTGCCCAAAACTTGCTAAGGAGGATTCTTGACCCCAATCCTCTTACCCGGATAACACTGGCCGGCGTCAAAGAAGATGAGTGGTTCAGGCACGAAAATGTTCCATCAAATCCTGAGGACGAAGAAGAGGGAGAGAAAAAGAATGCGTGCACCGACGATGAAGCCTTTTCAACCCGTGACGTGCCACGTGAAGCAGAACAGAAGAGTCCTGATTCATCAACCCTTATCAATGCATTTCAGTTGATAGCAATGTCTTCATGCTTAGATCTCTCAGGCTTCTTTGAGAAAGAGGATGTTTCTGAGAGGAAGATGAGATTTACATCCAATCATGCAGCAAAAGATCTGATCGCAAAGATTGAAGATATTGGAACAGGAATGGGATTTAGAGTCCAGAAGAAAAATGGAAAATTGAAAGTGATACAAGAGAATAAGGCGCACAGAGGTCTGGGTGGCCTATCGGTGGCAGCAGAGGTTTTTGAAATAAATCCATCCTTGCACGTGGTAGAGTTAAGTAAATCGTACGGAGACTCTTCTGTGTATGGACAGCTATGCAACAAACTATCAGATGATTTGGCAGTAGCCCCGAGACAGGCGCATGTAAAATCAGAAGCGAGAGACATCGGAGAGAAGACTTAA	1380	0.4529	MVILRLGNTRKEKEEGMRLANYEIGTTLGSGSFGKVKLAKHIDSHKLFALKIIDKTKIIHLNIAHQIKREIATLKLLKHPNVVRLHEVLASKTNIYMVLEYVAGGELFDRIASKGRLKEAEGRKLFQQLIDGVSYCHNKGVFHRDLKLENVLVDAQGNIKITDFGLSALPQHIRADGLLHTTCGSPSYVAPEVLANRGYEGATSDTWSCGIILFVILTGYLPFEDRNMAVLYQKISKGDVRIPKWLSPGAQNLLRRILDPNPLTRITLAGVKEDEWFRHENVPSNPEDEEEGEKKNACTDDEAFSTRDVPREAEQKSPDSSTLINAFQLIAMSSCLDLSGFFEKEDVSERKMRFTSNHAAKDLIAKIEDIGTGMGFRVQKKNGKLKVIQENKAHRGLGGLSVAAEVFEINPSLHVVELSKSYGDSSVYGQLCNKLSDDLAVAPRQAHVKSEARDIGEKT	459

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral1576g00128	459	SUPERFAMILY	Protein kinase-like (PK-like)	20	302	IPR011009	-
	Pral1576g00128	459	Gene3D	Phosphorylase Kinase; domain 1	8	103	-	-
	Pral1576g00128	459	FunFam	Non-specific serine/threonine protein kinase	321	442	-	-
	Pral1576g00128	459	Gene3D	Transferase(Phosphotransferase) domain 1	104	306	-	-
	Pral1576g00128	459	ProSiteProfiles	Protein kinase domain profile.	22	277	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral1576g00128	459	SMART	serkin_6	22	277	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral1576g00128	459	ProSitePatterns	Protein kinases ATP-binding region signature.	28	51	IPR017441	GO:0005524
	Pral1576g00128	459	FunFam	Non-specific serine/threonine protein kinase	13	101	-	-
	Pral1576g00128	459	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	141	153	IPR008271	GO:0004672\|GO:0006468
	Pral1576g00128	459	CDD	CIPK_C	325	439	-	-
	Pral1576g00128	459	Pfam	Protein kinase domain	22	277	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral1576g00128	459	PANTHER	CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED	16	424	-	-
	Pral1576g00128	459	FunFam	Non-specific serine/threonine protein kinase	15	321	-	-
	Pral1576g00128	459	Pfam	NAF domain	322	380	IPR004041	GO:0007165
	Pral1576g00128	459	MobiDBLite	consensus disorder prediction	277	315	-	-
	Pral1576g00128	459	MobiDBLite	consensus disorder prediction	277	320	-	-
	Pral1576g00128	459	Gene3D	Kinase associated domain 1, KA1	319	441	-	-
	Pral1576g00128	459	ProSiteProfiles	NAF domain profile.	319	343	IPR018451	GO:0007165

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral1576g00128	Pral-Chr1576	742911	747300	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral1576g00128	85	448	CBL-interacting serine-threonine protein kinases	AT3G17510	66.575	1.95e-172	486

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CAMK_CAMKL-CHK1	Pral1576g00128		Pkinase	9.8e-70	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral1576g00128	K07198		-	qsa:O6P43_003749	679.093