Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1576g00127 ATGGTCATCTTAAGACTGGGCAACACCCGCAAGGAGAAGGAAGAAGGAATGAGGCTTGCCAATTACGAAATCGGCACAACTCTGGGCAGTGGCAGCTTCGGAAAGGTGAAATTGGCCAAACACATCGATTCTCATAAACTCTTTGCCCTCAAGATCATCGACAAGACCAAGATCATTCACCTCAATATCGCTCATCAGATAAAGAGGGAGATAGCCACCCTCAAGCTTCTGAAGCATCCCAACGTCGTCAGATTACACGAGGTTTTAGCTAGCAAAACGAACATTTACATGGTCTTGGAGTACGTTGCTGGAGGAGAGTTGTTTGACAGAATTGCATCCAAAGGTAGGCTTAAAGAAGCTGAAGGCAGGAAGCTTTTCCAACAGTTAATTGATGGTGTGAGCTACTGTCACAATAAAGGTGTCTTCCACAGGGATCTTAAGCTGGAGAATGTACTGGTGGATGCCCAAGGCAACATAAAGATAACCGATTTTGGCCTCAGTGCTTTGCCCCAGCACATTAGGGCCGATGGGTTGCTGCACACAACCTGCGGAAGTCCCAGCTATGTTGCTCCCGAGGTCCTTGCTAATAGAGGCTATGAAGGTGCAACATCAGATACATGGTCATGTGGTATTATCTTGTTTGTAATTCTAACGGGATATCTTCCTTTTGAAGATCGGAACATGGCCGTTCTCTATCAAAAGATATCCAAAGGAGATGTCCGGATACCAAAATGGCTATCACCTGGTGCCCAAAACTTGCTAAGGAGGATTCTTGACCCCAATCCTCTTACCCGGATAACACTGGCCGGCGTCAAAGAAGATGAGTGGTTCAGGCACGAAAATGTTCCATCAAATCCTGAGGACGAAGAAGAGGGAGAGAAAAAGAATGCGTGCACCGACGATGAAGCCTTTTCAACCCGTGACGTGTTGATAGCAATGTCTTCATGCTTAGATCTCTCAGGCTTCTTTGAGAAAGAGGATGTTTCTGAGAGGAAGATGAGATTTACATCCAATCATGCAGCAAAAGATCTGATCGCAAAGATTGAAGATATTGGAACAGGAATGGGATTTAGAGTCCAGAAGAAAAATGGAAAATTGAAAGTGATACAAGAGAATAAGGCGCACAGAGGTCTGGGTGGCCTATCGGTGGCAGCAGAGGTTTTTGAAATAAATCCATCCTTGCACGTGGTAGAGTTAAGTAAATCGTACGGAGACTCTTCTGTGTATGGACAGCTATGCAACAAACTATCAGATGATTTGGCAGTAGCCCCGAGACAGGCGCATGTAAAATCAGAAGCGAGAGACATCGGAGAGAAGACTTAA 1323 0.4535 MVILRLGNTRKEKEEGMRLANYEIGTTLGSGSFGKVKLAKHIDSHKLFALKIIDKTKIIHLNIAHQIKREIATLKLLKHPNVVRLHEVLASKTNIYMVLEYVAGGELFDRIASKGRLKEAEGRKLFQQLIDGVSYCHNKGVFHRDLKLENVLVDAQGNIKITDFGLSALPQHIRADGLLHTTCGSPSYVAPEVLANRGYEGATSDTWSCGIILFVILTGYLPFEDRNMAVLYQKISKGDVRIPKWLSPGAQNLLRRILDPNPLTRITLAGVKEDEWFRHENVPSNPEDEEEGEKKNACTDDEAFSTRDVLIAMSSCLDLSGFFEKEDVSERKMRFTSNHAAKDLIAKIEDIGTGMGFRVQKKNGKLKVIQENKAHRGLGGLSVAAEVFEINPSLHVVELSKSYGDSSVYGQLCNKLSDDLAVAPRQAHVKSEARDIGEKT 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1576g00127 440 FunFam Non-specific serine/threonine protein kinase 13 101 - -
Pral1576g00127 440 Pfam Protein kinase domain 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1576g00127 440 CDD CIPK_C 310 420 - -
Pral1576g00127 440 Pfam NAF domain 310 361 IPR004041 GO:0007165
Pral1576g00127 440 ProSiteProfiles Protein kinase domain profile. 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1576g00127 440 SMART serkin_6 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1576g00127 440 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Pral1576g00127 440 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 16 405 - -
Pral1576g00127 440 Gene3D Phosphorylase Kinase; domain 1 8 103 - -
Pral1576g00127 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Pral1576g00127 440 FunFam Non-specific serine/threonine protein kinase 302 423 - -
Pral1576g00127 440 Gene3D Kinase associated domain 1, KA1 305 422 - -
Pral1576g00127 440 FunFam Non-specific serine/threonine protein kinase 15 311 - -
Pral1576g00127 440 Gene3D Transferase(Phosphotransferase) domain 1 104 304 - -
Pral1576g00127 440 SUPERFAMILY Protein kinase-like (PK-like) 20 287 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1576g00127 Pral-Chr1576 742911 747302 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1576g00127 85 429 CBL-interacting serine-threonine protein kinases AT3G17510 63.562 1.56e-164 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pral1576g00127 Pkinase 8.7e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1576g00127 K07198 - qsa:O6P43_003749 642.114