Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1576g00122 ATGGCATCGGGTCTAAATTCAGGACTGTCCAAGAAAACATTTGTTTTTGGTTTGAAATTGTGGGTGTTAATGGGGATAACAGTTGGTTTGTTCATTGTGATAATTCTTGTGGTGTTAGTATGTCTTACTTCACGAAAGCGATCCAAAAGTGTCAATGGCAAGATTCCCTTTAGCCACATGCTATCAATTTCGGAAGAGATCAAAGAGATTAGAGTTGATCAAGTTTCAGCTAATAACCATATGCAGAGTGGTGCTTTCATGAGTCTGAATGACAAATTTAGTGACAGGGATTCTGAGAAGGTTTTGATCCAAACAAAAAATGGGGATACTAGCAGTCAATCAGGTTCATTTAATCATATGGACAAAGATGCTGCTGGTTCTCAATCTGGCGAAGAAAGTGGTGCTATGACCATTTCTGCCTACAGGTCATCTTTGCATCCTATAACTGCACCATCACCATTGTCTGGTCTGCCTGAGTTCTCTCACCTTGGCTGGGGGTACTGGTTTACATTGAGGGACCTAGAACTTGCAACAAAAAGGTTTTCAAGAGACAATGTTATTGGTGAAGGTGGATATGGAATTGTTTATCGTGGTCAGCTAATTAATGGGAACCCAGTGGCTGTTAAGAAGCTGCTCAATAATTTAGGACAAGCTGAAAAGGAATTTAGAGTGGAGGTTGAGGCTATTGGTCATGTGCGCCATAAAAACTTGGTTCGACTTCTGGGTTATTGCATTGAAGGGACTCACAGGTTGCTGGTTTATGAATACGTTAACAATGGCAATCTAGAGCAATGGCTTCATGGAGCTATGCGGCAATATGGGTATCTAACTTGGGATGCACGAATGAAAGTTTTGCTTGGCACTGCTAAAGCGCTGGCCTACTTGCATGAAGCAATTGAACCTAAAGTGGTGCATCGGGACATTAAGTCAAGCAATATTCTAATTGATGATGACTTCAATGCCAAAATATCTGACTTTGGGCTCGCTAAGTTGCTTGGCGCTGGTAAAAGTCATATTACAACTAGAGTAATGGGTACTTTTGGATACGTGGCTCCTGAATATGCCAATTCTGGCTTGCTAAATGAAAAGAGTGATGTTTATAGTTTTGGGGTATTACTTCTTGAAGCAATTACTGGTAGGGACCCAGTGGATTATGGTCGACCAGCAGCTGAGGTAAATTTGGTAGATTGGCTCAAAATGATGGTAGGGAGTAGGCGTTCAGAAGAGGTGGTGGACCCCAACATTGAGACTAGGCCATCAACAAGCGCCCTTAAACGAGCCCTCTTGACTGCTTTGAGGTGCGTTGATCCTGATGCTGAGAAAAGACCGAAGATGAGTCAAGTTGTCCGTATGCTTGAATCGGAAGAATATCCCATACCAAGAGAGGATCGAAGACGCCGAAGAAGTCAGGCAGGAAACTTAGAGGGGCAGGAGCAGAGGGAGACTTCTGATACAGAGAAGAGTGACAATCCAGATTACAGGTCCAATGGCAGAATGAAGCAACAGAGTTAG 1512 0.4292 MASGLNSGLSKKTFVFGLKLWVLMGITVGLFIVIILVVLVCLTSRKRSKSVNGKIPFSHMLSISEEIKEIRVDQVSANNHMQSGAFMSLNDKFSDRDSEKVLIQTKNGDTSSQSGSFNHMDKDAAGSQSGEESGAMTISAYRSSLHPITAPSPLSGLPEFSHLGWGYWFTLRDLELATKRFSRDNVIGEGGYGIVYRGQLINGNPVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRLLVYEYVNNGNLEQWLHGAMRQYGYLTWDARMKVLLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVLLLEAITGRDPVDYGRPAAEVNLVDWLKMMVGSRRSEEVVDPNIETRPSTSALKRALLTALRCVDPDAEKRPKMSQVVRMLESEEYPIPREDRRRRRSQAGNLEGQEQRETSDTEKSDNPDYRSNGRMKQQS 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1576g00122 503 SMART serkin_6 181 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1576g00122 503 ProSiteProfiles Protein kinase domain profile. 181 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1576g00122 503 FunFam Putative receptor-like serine/threonine-protein kinase 257 468 - -
Pral1576g00122 503 MobiDBLite consensus disorder prediction 105 123 - -
Pral1576g00122 503 Gene3D Phosphorylase Kinase; domain 1 164 256 - -
Pral1576g00122 503 MobiDBLite consensus disorder prediction 105 133 - -
Pral1576g00122 503 FunFam Putative receptor-like protein kinase 163 256 - -
Pral1576g00122 503 ProSitePatterns Serine/Threonine protein kinases active-site signature. 303 315 IPR008271 GO:0004672|GO:0006468
Pral1576g00122 503 CDD STKc_IRAK 187 453 - -
Pral1576g00122 503 PANTHER OS01G0323000 PROTEIN 5 483 - -
Pral1576g00122 503 SUPERFAMILY Protein kinase-like (PK-like) 165 460 IPR011009 -
Pral1576g00122 503 Pfam Protein kinase domain 182 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1576g00122 503 MobiDBLite consensus disorder prediction 442 503 - -
Pral1576g00122 503 Gene3D Transferase(Phosphotransferase) domain 1 257 468 - -
Pral1576g00122 503 ProSitePatterns Protein kinases ATP-binding region signature. 187 210 IPR017441 GO:0005524
Pral1576g00122 503 MobiDBLite consensus disorder prediction 442 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1576g00122 Pral-Chr1576 719400 723808 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1576g00122 17 455 Trihelix Transcription Factor Family AT1G70460 39.189 3.18e-95 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Pral1576g00122 Pkinase 9.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1576g00122 - - gmx:732653 860.522