Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1576g00121 ATGAGCTGCTTTGGCTGTTGCAAAAAAGGTGACGATCACCAGGCTCCTGATAATGGGCCCTTCGTCCCAAAGCCAACCTATCCCGCTGGGGTCAGTGGTTATACTGGTAGACAATTTTCAACGACCACTCCACACACCGTTAATGTTCAACCCATTGCGGTCCCTTCCATTTCAGTTGATGAAATGAAGTCCCTGACTGATAATTTTGGCGCAAAATCTTACATTGGTGAGGGGGCATACGGTAAGGTATACCACGGTGTATTGAAAAATGGGCGTCACGTGGCGATTAAGAGGTTAGATTCCAGCAGGCAACCAGAGAGCGAATTCCTTGCTCAGGTCTCAATCGTATCAAGGCTAAAGCACGAAAATGTTGTTGAGCTTCTTGGTTATTGTGCCGATGGTGCTTTCCGAGCCCTGGCCTTTGAGTATGCTCCTAAAGGAACTCTTCATGATATTCTACATGGACGCAAAGGCGTGAGGGATGCACAACCAGGTCCAACACTGTCATGGGCACAAAGAGTTAAAATTGCAGTGGGGGCAGCTAGAGGACTTGAATATCTACATGAAAAAGCAGAGACCAACATCATCCATCGTTACATCAAGTCTTGCAACATACTACTTTTCGAAGATGATGTTGCAAAGATTGCTGATTTTGATTTGTCAAATCAAGCCCCTGATGCTGCTGCTCGTCTCCATTCTACTCGTGTTCTTGGAACCTTCGGTTACTATGCTCCAGAATATGCCATGACGGGTCAGCTCACTTCGAGAAGCGACGTCTACAGTTTTGGGGTTATACTTCTAGAACTCTTAACCGGACGCAAACCTGTTGATCATACACTGCCGCGAGGGCAGCAGAGCCTTGTCACCTGGGCAACGCCACAACTGAGTGAAGACAAAGTGAAGCAGTGCGTGGATGTGAAATTAAAGGGAGAATACCCTCCAAAGGCAGTTGCAAAGATGGCTGCTGTTGCTGCACTGTGTGTGCAATATGAAGCTGAGTTTCGGCCAAATATGAGCATTGTAGTGAAAGCTCTACAGCCTCTTCTTAATCCTCGGTCTTCCGTTCACACAAAGCGGCCTCCCAACTTTTAA 1092 0.4707 MSCFGCCKKGDDHQAPDNGPFVPKPTYPAGVSGYTGRQFSTTTPHTVNVQPIAVPSISVDEMKSLTDNFGAKSYIGEGAYGKVYHGVLKNGRHVAIKRLDSSRQPESEFLAQVSIVSRLKHENVVELLGYCADGAFRALAFEYAPKGTLHDILHGRKGVRDAQPGPTLSWAQRVKIAVGAARGLEYLHEKAETNIIHRYIKSCNILLFEDDVAKIADFDLSNQAPDAAARLHSTRVLGTFGYYAPEYAMTGQLTSRSDVYSFGVILLELLTGRKPVDHTLPRGQQSLVTWATPQLSEDKVKQCVDVKLKGEYPPKAVAKMAAVAALCVQYEAEFRPNMSIVVKALQPLLNPRSSVHTKRPPNF 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1576g00121 363 Gene3D Phosphorylase Kinase; domain 1 32 143 - -
Pral1576g00121 363 PIRSF ILK 32 358 - -
Pral1576g00121 363 Pfam Protein tyrosine and serine/threonine kinase 73 345 IPR001245 GO:0004672|GO:0006468
Pral1576g00121 363 Gene3D Transferase(Phosphotransferase) domain 1 145 359 - -
Pral1576g00121 363 CDD STKc_IRAK 75 348 - -
Pral1576g00121 363 FunFam pto-interacting protein 1 145 356 - -
Pral1576g00121 363 ProSitePatterns Protein kinases ATP-binding region signature. 75 97 IPR017441 GO:0005524
Pral1576g00121 363 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 34 351 - -
Pral1576g00121 363 SUPERFAMILY Protein kinase-like (PK-like) 45 345 IPR011009 -
Pral1576g00121 363 ProSiteProfiles Protein kinase domain profile. 69 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1576g00121 Pral-Chr1576 715053 718274 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1576g00121 61 354 Receptor kinase-like Gene Family AT3G58690 47.973 2.96e-87 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Pral1576g00121 PK_Tyr_Ser-Thr 5.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1576g00121 K13436 - gmx:547595 576.63