Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral1576g00107 | ATGGACGTCAAAGGAAGAGGAAGCGCCTCCCCCACTCTCCAAGCCGACGTCGTCGACGACCTCGACCTCAGGCGAGGCCCTTGGACGGTCGATGAGGACCTCACCCTCATCAATTACATCACCACTCACGGCGAAGGTCGCTGGAACTCTCTTGCCCGCTCCGCTGGCCTCAAACGTACTGGCAAGAGCTGCAGATTGAGGTGGCTCAACTATCTCCGCCCCGATGTTCGACGTGGAAATATCACACTGGAAGAACAGCTTCTGATTCTCGAACTTCATTCTCGCTGGGGAAACAGGTGGTCCAAGATAGCCCAGTTTTTGCCGGGAAGAACCGACAACGAGATCAAGAATTACTGGAGAACCCGCGTCCAAAAGCATGCCAAACAACTCAAATGTGACGTGAATAGCAAGCAATTCAAGGACACTATGCGCTACCTTTGGATGCCAAGGCTGGTTGAGCGCATTCAAGCAGCTGCCGCCACGGCTGCCACCGCCACGACAACGGCAAGTTCTCAGACGTTATCTGCCGCCACAACCGGCACCACAAACTCCACATACAATCCTTATTATAATAACAACATGGAAGTTGAGAATGGGAACATGCTCATGAACCCGGCCCCCATCATGAATAATAATGACTTTGGAGGCTCACAGGTCACTCAGAGCTACACGCCGGAAAACAGCAGCACAGGTGCTTCATCGGACTCGTTCGGAACACAGGTTTCGCCTGTGTCGGAGTTGACTGATATTTACAGTACCGTCCCTAATCAGGATTACTACCAACCCTCTCAGATCAGCTACTCTGATTGCATCACCAGCCCATCCGGGTTATACCCTCAAGGATTGGATTATACCCAGGTGATGGAGCCGAGCAACCCGTGGATTCAGGGCGGGGACACGTTAGACAATTTGTGGAATGTTGAGAATATGATGTTTTTACAGCAGCAGCTCAACAGTGACAGCATGTAA | 969 | 0.5181 | MDVKGRGSASPTLQADVVDDLDLRRGPWTVDEDLTLINYITTHGEGRWNSLARSAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQFLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAATAATATTTASSQTLSAATTGTTNSTYNPYYNNNMEVENGNMLMNPAPIMNNNDFGGSQVTQSYTPENSSTGASSDSFGTQVSPVSELTDIYSTVPNQDYYQPSQISYSDCITSPSGLYPQGLDYTQVMEPSNPWIQGGDTLDNLWNVENMMFLQQQLNSDSM | 322 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral1576g00107 | 322 | ProSiteProfiles | Myb-like domain profile. | 73 | 123 | IPR001005 | - | |
Pral1576g00107 | 322 | PANTHER | MYB TRANSCRIPTION FACTOR-RELATED-RELATED | 22 | 204 | IPR044676 | GO:0003700|GO:0006355|GO:0043565 | |
Pral1576g00107 | 322 | ProSiteProfiles | Myb-like domain profile. | 20 | 72 | IPR001005 | - | |
Pral1576g00107 | 322 | MobiDBLite | consensus disorder prediction | 216 | 239 | - | - | |
Pral1576g00107 | 322 | CDD | SANT | 98 | 121 | IPR001005 | - | |
Pral1576g00107 | 322 | Gene3D | - | 82 | 145 | - | - | |
Pral1576g00107 | 322 | CDD | SANT | 27 | 72 | IPR001005 | - | |
Pral1576g00107 | 322 | Pfam | Myb-like DNA-binding domain | 25 | 72 | IPR001005 | - | |
Pral1576g00107 | 322 | Pfam | Myb-like DNA-binding domain | 78 | 121 | IPR001005 | - | |
Pral1576g00107 | 322 | FunFam | Myb transcription factor | 25 | 77 | - | - | |
Pral1576g00107 | 322 | SMART | sant | 77 | 125 | IPR001005 | - | |
Pral1576g00107 | 322 | SMART | sant | 24 | 74 | IPR001005 | - | |
Pral1576g00107 | 322 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 73 | 127 | IPR017930 | - | |
Pral1576g00107 | 322 | Gene3D | - | 25 | 77 | - | - | |
Pral1576g00107 | 322 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 20 | 72 | IPR017930 | - | |
Pral1576g00107 | 322 | SUPERFAMILY | Homeodomain-like | 22 | 119 | IPR009057 | - | |
Pral1576g00107 | 322 | FunFam | MYB transcription factor | 82 | 145 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral1576g00107 | Pral-Chr1576 | 571066 | 573116 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral1576g00107 | 1 | 313 | MYB Transcription Factor Family | AT3G06490 | 54.790 | 1.05e-89 | 269 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Pral1576g00107 | Myb_DNA-binding | 1.8e-14 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral1576g00107 | K09422 | - | gmx:100791349 | 421.779 |