Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1576g00104 ATGGAGGAAAGCCTACCTCCTGGGTTCAGATTCCATCCGACAGATGAAGAGCTCATCACATACTATCTGACAAGGAAGGTGTGTGATACAGGCTTCACATCCAAAGCCATAGCAGTTGTTGATCTCAACAAGAATGAACCTTGGGATCTTCCAGGAAAAGCATCGATGGGAGAGAAGGAATGGTATTTCTTCAGCGTGAGAGATAGGAAGTACCCGACGGGGCTGAGAACGAACAGGGCGACGGAATCAGGGTACTGGAAAACAACAGGCAAAGACAAAGAGATAATGAGGGAAGGGGCGCTGGTTGGGATGAAGAAGACACTGGTGTTCTACAAGGGTAGAGCTCCCAGGGGTGAGAAAAGCAATTGGGTTATGCATGAATACCGCCTCCACAATAAGCACTCCTTTAGGGCTTCCAAGGAAGAATGGGTGGTGTGCAGGGTGTTCCAGAAAAGCTCAGCGGCAAAGAAAATACAACAGACGTCATCCTCACAACTATCTCTGGACTCTCCTCCTGATAATACCTCTTTGCTCAATGACTTCCCTGACGTTGACCTCCCAAATTTAAACACCATCGCTCCAAATTCATCAACTGCCTTCACCACCATGTCCTCCGATGATGTCAATACCAATATGAACTTAACCATGAACTGGCCTCCCGCATCTCTTCCATCCCTCCCCTGGCCTTCTGGCTTGCTCAATCCAAACCTTTCTGTGAATTCCTTGCTTCTCAAGGCACTACAGCTTCGCACTTGTCAACAAAGAGAAATTGCTTCTTACATGCCGCCTCACGGAGTTTCTCATCATCAACTAATGGGGACTGATCATCTCCCTCCAAATTTCACACTCGATGCTTCTTCCTCGTCAAAGGTTTTGGAGATGCCGCAGCAACAGCAGCATCAGCAGGAGCAACCGTTCAATCTGGACTCCATTTGGTGA 939 0.4803 MEESLPPGFRFHPTDEELITYYLTRKVCDTGFTSKAIAVVDLNKNEPWDLPGKASMGEKEWYFFSVRDRKYPTGLRTNRATESGYWKTTGKDKEIMREGALVGMKKTLVFYKGRAPRGEKSNWVMHEYRLHNKHSFRASKEEWVVCRVFQKSSAAKKIQQTSSSQLSLDSPPDNTSLLNDFPDVDLPNLNTIAPNSSTAFTTMSSDDVNTNMNLTMNWPPASLPSLPWPSGLLNPNLSVNSLLLKALQLRTCQQREIASYMPPHGVSHHQLMGTDHLPPNFTLDASSSSKVLEMPQQQQHQQEQPFNLDSIW 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1576g00104 312 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 240 - -
Pral1576g00104 312 SUPERFAMILY NAC domain 3 151 IPR036093 GO:0003677|GO:0006355
Pral1576g00104 312 FunFam NAC domain-containing protein 100-like 14 155 - -
Pral1576g00104 312 MobiDBLite consensus disorder prediction 282 312 - -
Pral1576g00104 312 ProSiteProfiles NAC domain profile. 5 151 IPR003441 GO:0003677|GO:0006355
Pral1576g00104 312 Gene3D NAC domain 14 156 IPR036093 GO:0003677|GO:0006355
Pral1576g00104 312 Pfam No apical meristem (NAM) protein 6 130 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1576g00104 Pral-Chr1576 532326 534761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1576g00104 1 312 NAC Transcription Factor Family AT3G18400 59.394 4.63e-115 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral1576g00104 NAM 8.6e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1576g00104 - - gmx:100775645 402.905