Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1576g00098 ATGGCTGAGTTTACAACAGATTTGCAAGCCTTTAGGTCACCTTTTCATTTCTTTGATTTTGATCCAAGCATGGAACTGATAAACCAATTCACAGGGATGAGCCCACGTGTCTTGGACAGCTCAAATCTTAATTTTCAGAGCTTGATGCCTTTTTCCTGTGACACCTCCTTAGGCTTCCCTGAGCCTCAACTTGAAAGAAAATTTGAGGAAAATTTTCCTAGCTTTGTCCATCATGTCAATCACAATGCTGTACCAGTTTCTTTGCCCAGTTTACCTGAGGAAAGTGAAATCCACGAAAGTAAAAAGAGGAAACCAACAGATGTGCTAGAGACGAGTTCTACAAATTCAACGTCTGCAGTTTTTGAGAGTGGAAGCAAAATAAAAACTAGTTCCGGAAGAAGTAAGAGAGTAAAAGGCAATGAAACAGATGTGGACAATTCAAAGGAAGTGGTTCATGTCAGAGCCAAAAGAGGTCAAGCTACTGATAGTCACAGTTTAGCAGAAAGGGTTAGAAGAGGGAAAATCAATGAGAAGTTAAGGTGCTTACAGAATATTGTACCAGGATGCAGCAAGACTATGGGTATGGCAGTAATGTTGGATGAGATCATAAATTATGTTCAATCCTTGCAGCATCAAGTGGAGTTCCTCTCCATGAAGCTTACTGCAGCAAGCAACTTCTATGACTTCAATTCAGAGACAGATGCTTTGGAAACAATGCAGCGAGCAATGGCAGCTGAGGCAAAAGAGTTATCCAAACATGGGAGAGAAGGCTGCGTGGGAATTTCTTGTTTTCAAGCAACCTGGCCCTTCTGA 813 0.4145 MAEFTTDLQAFRSPFHFFDFDPSMELINQFTGMSPRVLDSSNLNFQSLMPFSCDTSLGFPEPQLERKFEENFPSFVHHVNHNAVPVSLPSLPEESEIHESKKRKPTDVLETSSTNSTSAVFESGSKIKTSSGRSKRVKGNETDVDNSKEVVHVRAKRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCSKTMGMAVMLDEIINYVQSLQHQVEFLSMKLTAASNFYDFNSETDALETMQRAMAAEAKELSKHGREGCVGISCFQATWPF 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1576g00098 270 Gene3D - 156 228 IPR036638 GO:0046983
Pral1576g00098 270 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 159 209 IPR011598 GO:0046983
Pral1576g00098 270 MobiDBLite consensus disorder prediction 109 130 - -
Pral1576g00098 270 MobiDBLite consensus disorder prediction 93 145 - -
Pral1576g00098 270 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 157 225 IPR036638 GO:0046983
Pral1576g00098 270 FunFam transcription factor BEE 3-like 156 227 - -
Pral1576g00098 270 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 94 237 IPR024097 GO:0006355
Pral1576g00098 270 SMART finulus 165 215 IPR011598 GO:0046983
Pral1576g00098 270 CDD bHLH_AtBPE_like 149 234 - -
Pral1576g00098 270 MobiDBLite consensus disorder prediction 94 108 - -
Pral1576g00098 270 Pfam Helix-loop-helix DNA-binding domain 163 210 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1576g00098 Pral-Chr1576 505387 507669 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1576g00098 59 257 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 51.869 5.38e-57 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral1576g00098 HLH 2.2e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1576g00098 - - gmx:100803700 365.54