Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1576g00097 ATGTACACATCAAGGAAGAAAATCCACAAAGATAATGATGCTGAACCAACTGAGTTTGAAGAGTCTGTTGGACAGGCTTTTTTTTATCTGGAAAATACCAACCAGGAGCTGAAAAGTGATCTTAAAGATCTATACATAAATTCAGCAGTCCAAGTTGATGTTTCTGGGAACCGCAAGGCTGTGGTTATTCATGTTCCCTACAGATTGAGGAAACCTTTCCGAAAGATTCATGTTAGACTTGTCAGAGAGCTTGAGAAGAAATTCAGTGGAAAGGATGTAATTCTGATTGCAACCCGGAGGATATCCAGGCCACCAAAGAAAGGATCTGCTGTACAGCGTCCTCGAAGCCGTACACTTACTGCTGTGCATGAAGCTATGCTGGAGGATATTGTATTGCCTGCTGAGATTGTTGGGAAGCGCATTCGGTATCGAGTTGATGGATCTAAAATTATGAAGGTTTTCTTGGACCCAAAGGAGCGAAACAACACAGAGTACAAGCTGGATGCTTTTGCTGCAGTATATAGGAAGCTGTCAGGCAGAGATGTTGTGTTTGAGTATCCTATTACGGAAGCTTGA 576 0.4236 MYTSRKKIHKDNDAEPTEFEESVGQAFFYLENTNQELKSDLKDLYINSAVQVDVSGNRKAVVIHVPYRLRKPFRKIHVRLVRELEKKFSGKDVILIATRRISRPPKKGSAVQRPRSRTLTAVHEAMLEDIVLPAEIVGKRIRYRVDGSKIMKVFLDPKERNNTEYKLDAFAAVYRKLSGRDVVFEYPITEA 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1576g00097 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Pral1576g00097 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Pral1576g00097 191 PANTHER 40S RIBOSOMAL PROTEIN S7 1 190 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1576g00097 Pral-Chr1576 498823 501268 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1576g00097 1 191 Cytoplasmic Ribosomal Protein Gene Family AT1G48830 77.487 3.86e-112 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1576g00097 K02993 - cave:132184121 352.829