Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1576g00095 ATGCAGGAGAGTAGTACGGAGCTGCAAGCTATCAGTCAGGCGCTTACATTTTCGAAGAAGCTAATTCAGATTTTGGATTTTCATGTATACGAGGAGAATCAACTTAATATTAAGGTCGCTGTTGGCGGAAGCGCCGTGGAATTCGTGCTCTCACGACAATCCATGAGTTTTGTGTTTAGATTATGCCCCTGCTGCAGCAAGAGGTTCAAGGACAACGCAGCCTCTGATTCCCTTGATCCTCAAGCAGCCAACGATGGTGCCGACACCTGGGACCTCTTTTTCGACCTCCACACTCTGCAGCTAGCTACCAACTTCTTCTCCGAGTTGAACCAATTAGGTCATGGAGGGTTTGGTCCTGTTTACAAGGGATTGATGCCAAATGGTCAAGAAATAGCTGTGAAGAAGCTGTCTCTGGAATCAAGACAAGGAATTAGAGAATTTACCAATGAGGTCAAACTACTACTGAGAATTCAGCACAAGAACTTGGTTACTTTATATGGATGTTGTGCTGAAGGACCTGAAAAGATGCTTGTTTATGAATATCTCCCGAACAAGAGTCTTGATCACTTTCTCTTCGGTGTGGCAAGAGGGCTTCTGTACCTGCATGAAGAGGCCCCAATAAGAATAATTCATAGAGACATCAAAGCCAGTAACATTTTGCTGGATGAGAAATTAAACGCAAAAATTTCGGACTTTGGCTTGGCGAGGTTATTTCCTGGGGATGACACCCATGTGCAGACATTTAAGATTTCTGGTACACATGGTTACATGGCTCCTGAGTATGCATTGCGTGGATACTTGTCTGTAAAGACTGATGTTTTTAGTTATGGAGTCTTGGTATTAGAAATTGTCAGTGGGAGGAAAAACCATGACCGGCTACTTGGTGAAGAGCAGGCAGATCTGTTGAACCATGCATGGAAGCTTTATCAGGCGGGGAAGATAATGGATTTGATTGACACAAGCCTAGGCAAATACAATGGTGACGAGGCAGCGATGTGCATTCAGCTGGGCTTGTTGTGCTGCCAAGCAAGCATATCAGAGAGACCTGATATGAATGCTGTTCATCTGATGCTCTCAAGTGACTCGTTCACTTTGCCAAGACCCAGTAAACCTGGAATTCAAGGCCGCATAGGACGTTGGACTACCACCTCATCCTCTGCTTTCACCAATACTAATGCTACTACTGCGACGAAGGCTTCTGGGGGAAGTAGCATAGTTGAGGACTATTCTAGAAATTCTATCTCCATTTCTTCGTTTGATGAAGGAAGATGA 1272 0.4458 MQESSTELQAISQALTFSKKLIQILDFHVYEENQLNIKVAVGGSAVEFVLSRQSMSFVFRLCPCCSKRFKDNAASDSLDPQAANDGADTWDLFFDLHTLQLATNFFSELNQLGHGGFGPVYKGLMPNGQEIAVKKLSLESRQGIREFTNEVKLLLRIQHKNLVTLYGCCAEGPEKMLVYEYLPNKSLDHFLFGVARGLLYLHEEAPIRIIHRDIKASNILLDEKLNAKISDFGLARLFPGDDTHVQTFKISGTHGYMAPEYALRGYLSVKTDVFSYGVLVLEIVSGRKNHDRLLGEEQADLLNHAWKLYQAGKIMDLIDTSLGKYNGDEAAMCIQLGLLCCQASISERPDMNAVHLMLSSDSFTLPRPSKPGIQGRIGRWTTTSSSAFTNTNATTATKASGGSSIVEDYSRNSISISSFDEGR 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1576g00095 423 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 53 392 - -
Pral1576g00095 423 FunFam Cysteine-rich receptor-like protein kinase 2 73 181 - -
Pral1576g00095 423 Gene3D Transferase(Phosphotransferase) domain 1 180 364 - -
Pral1576g00095 423 ProSiteProfiles Protein kinase domain profile. 106 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1576g00095 423 SUPERFAMILY Protein kinase-like (PK-like) 94 374 IPR011009 -
Pral1576g00095 423 Pfam Protein kinase domain 107 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1576g00095 423 FunFam Lectin-domain containing receptor kinase A4.3 179 373 - -
Pral1576g00095 423 SMART serkin_6 106 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1576g00095 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Pral1576g00095 423 Gene3D Phosphorylase Kinase; domain 1 72 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1576g00095 Pral-Chr1576 494776 498118 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1576g00095 82 373 Receptor kinase-like Gene Family AT4G21410 50.955 2.99e-98 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral1576g00095 Pkinase 3.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1576g00095 - - tpra:123884781 579.326