Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1576g00094 ATGCAGGAGAGTAGTACGGAGCTGCAAGCTATCAGTCAGGCGCTTACATTTTCGAAGAAGCTAATTCAGATTTTGGATTTTCATGTATACGAGGAGAATCAACTTAATATTAAGGTCGCTGTTGGCGGAAGCGCCGTGGAATTCGTGCTCTCACGACAATCCATGAGTTTTGTGTTTAGATTATGCCCCTGCTGCAGCAAGAGGTTCAAGGACAACGCAGCCTCTGATTCCCTTGATCCTCAAGCAGCCAACGATGGTGCCGACACCTGGGACCTCTTTTTCGACCTCCACACTCTGCAGCTAGCTACCAACTTCTTCTCCGAGTTGAACCAATTAGGTCATGGAGGGTTTGGTCCTGTTTACAAGGGATTGATGCCAAATGGTCAAGAAATAGCTGTGAAGAAGCTGTCTCTGGAATCAAGACAAGGAATTAGAGAATTTACCAATGAGGTCAAACTACTACTGAGAATTCAGCACAAGAACTTGGTTACTTTATATGGATGTTGTGCTGAAGGACCTGAAAAGATGCTTGTTTATGAATATCTCCCGAACAAGAGTCTTGATCACTTTCTCTTCGATAAAAGAAAATCACCATCTCTGGACTGGCCAACGCGATTTAAAATAGTTACAGGTGTGGCAAGAGGGCTTCTGTACCTGCATGAAGAGGCCCCAATAAGAATAATTCATAGAGACATCAAAGCCAGTAACATTTTGCTGGATGAGAAATTAAACGCAAAAATTTCGGACTTTGGCTTGGCGAGGTTATTTCCTGGGGATGACACCCATGTGCAGACATTTAAGATTTCTGGTACACATGGTTACATGGCTCCTGAGTATGCATTGCGTGGATACTTGTCTGTAAAGACTGATGTTTTTAGTTATGGAGTCTTGGTATTAGAAATTGTCAGTGGGAGGAAAAACCATGACCGGCTACTTGGTGAAGAGCAGGCAGATCTGTTGAACCATGCATGGAAGCTTTATCAGGCGGGGAAGATAATGGATTTGATTGACACAAGCCTAGGCAAATACAATGGTGACGAGGCAGCGATGTGCATTCAGCTGGGCTTGTTGTGCTGCCAAGCAAGCATATCAGAGAGACCTGATATGAATGCTGTTCATCTGATGCTCTCAAGTGACTCGTTCACTTTGCCAAGACCCAGTAAACCTGGAATTCAAGGCCGCATAGGACGTTGGACTACCACCTCATCCTCTGCTTTCACCAATACTAATGCTACTACTGCGACGAAGGCTTCTGGGGGAAGTAGCATAGTTGAGGACTATTCTAGAAATTCTATCTCCATTTCTTCGTTTGATGAAGGAAGATGA 1326 0.4427 MQESSTELQAISQALTFSKKLIQILDFHVYEENQLNIKVAVGGSAVEFVLSRQSMSFVFRLCPCCSKRFKDNAASDSLDPQAANDGADTWDLFFDLHTLQLATNFFSELNQLGHGGFGPVYKGLMPNGQEIAVKKLSLESRQGIREFTNEVKLLLRIQHKNLVTLYGCCAEGPEKMLVYEYLPNKSLDHFLFDKRKSPSLDWPTRFKIVTGVARGLLYLHEEAPIRIIHRDIKASNILLDEKLNAKISDFGLARLFPGDDTHVQTFKISGTHGYMAPEYALRGYLSVKTDVFSYGVLVLEIVSGRKNHDRLLGEEQADLLNHAWKLYQAGKIMDLIDTSLGKYNGDEAAMCIQLGLLCCQASISERPDMNAVHLMLSSDSFTLPRPSKPGIQGRIGRWTTTSSSAFTNTNATTATKASGGSSIVEDYSRNSISISSFDEGR 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1576g00094 441 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 53 410 - -
Pral1576g00094 441 Pfam Protein tyrosine and serine/threonine kinase 110 325 IPR001245 GO:0004672|GO:0006468
Pral1576g00094 441 SMART serkin_6 106 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1576g00094 441 CDD STKc_IRAK 112 376 - -
Pral1576g00094 441 Gene3D Transferase(Phosphotransferase) domain 1 182 382 - -
Pral1576g00094 441 FunFam Cysteine-rich receptor-like protein kinase 2 73 181 - -
Pral1576g00094 441 Gene3D Phosphorylase Kinase; domain 1 72 181 - -
Pral1576g00094 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Pral1576g00094 441 FunFam Cysteine-rich receptor-like protein kinase 41 182 382 - -
Pral1576g00094 441 SUPERFAMILY Protein kinase-like (PK-like) 94 392 IPR011009 -
Pral1576g00094 441 ProSiteProfiles Protein kinase domain profile. 106 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1576g00094 Pral-Chr1576 494776 498118 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1576g00094 82 391 Receptor kinase-like Gene Family AT4G21410 53.185 2.83e-108 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral1576g00094 PK_Tyr_Ser-Thr 1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1576g00094 - - tpra:123884781 612.453