Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1576g00091 ATGGCGACACCGATGGCGGGGCTGCAGCATTTGGAAGGAGGAGGAGGAGTGGCCGTGCTTTCCAATTCTGCCAACAAGGTCGATTCCTCCTCGCCGTCTACTGCGGCCTCCAATGGTGTCTTGGTCTATTCTGAATTGGAGTCCCCAATCTTGATTTTCTTATTCTTTCATAAGGCCATTCGAAATGAGCTTGATGCTCTTCACCGGTTAGCTATGGCATTTGCAACGGGCAACTGCTCCGATATTCAGCCCCTCTTCGAGCGCTATCATTTCGTTAGATCCATTTATAGACACCACTCCAATGCTGAAGATGAGGTGATTTTTCCTGCTCTCGATATACGTGTGAAGAATGTGGCCCAGACATATTCTCTTGAACACAAGGGTGAAAGCAATCTCTTTGATCATCTATTTGAGCTGCTAAATTCTAATATCCAAAATGATGAAAGTTTTTCAAAGGAGTTAGCGTCTTGCACGGGAGCTTTGCAGACATCAGTTAATCAACACATGGCTAAGGAAGAGGAGCAGGTATTTCCATTGCTTATTGAGAAATTCTCAATAGACGAACAGGCATCTCTAGTTTGGCAGTTTCTTTGCAGTATTCCTGTCAATACAATGACAGAATTTCTTCCTTGGCTCTCAACATCTATATCATCGGATGAATCTATTGATCTGCAGAAGTGCTTAAGCAAGATAGTACCAGGAGAAAAGCTTCTTCAAAAGGTTATTTTCACTTGGATGGAAGGTAGAAGTGGTGTTAACACAGTTGAAAGTTGTGCACATCATTCTCATGTTCGCTGCAGTCCTAGCCCATTAACCCATCTGATAGGGACGGCAAGCTGTGCTTGTGAGCCTGCAACAACTGGGAAAAGGAAACATCCTGAATCTATTCTAGATGGTTCTGATGCCACTGGAACACATCCTATTGATGAAATTTTGCTATGGCATAATGCGATAAAAAGAGAGTTGAGTGAGATAGTGGTGGAGACCAGAAAGATACAACTTTCTGGAAATTTTACTAATTTGTCAGCTTTTAACGAGAGATTACAGTTTATTGCTGAAGTTTGCATATTTCATAGTATTGCTGAGGACAAGGTTATATTTCCTGCTGTAGATGGCGAACTTTCTTTCTTTCAGGAGCATGCTGAAGAAGAAAGCCAATTTAATGAGTTCCGGCGTTTGATTGAAGGCATTCAGAGTGAAGGAGCAACATCCAATTCAGAAGCTGAATTTTATCCCAAGTTATGCTCATATGCTGATCATATAGTGGAAACCATACAGAGGCATTTCCGCAATGAAGAAGTTCAGGTTCTTCCACTGGCTCGGAAGCACTTCAGCTTCAAAAAACAACGTGAACTTTTGTACCAAAGCTTGTGTATGATGCCTCTGAAATTGATTGAAGGTGTCCTGCCTTGGTTGGTAGGATCATTAACCGAAGATGAAACAAAGATGTTTCTTAAAAACATGCAACTGGCAGCTCCTCCAACAGATTCTGCTTTAGTCACACTCTTCTGTGGTTGGGTTTGCAAGGCTCGTAAGGAGGGTCTGTGCTTGTTCTCAAGTGTACCAAGTTTCTTTCCTGCTAGAAATCTTGGTGGTACTGAAAACAACAGATTCCAGTCATCTTGTGCTTGTGCTTCTGCGCTTTCTTCTAATGGTTGCCCAGTATCAGCTGAATCAGATGAGAACAAAAAACTGGTCAAGCAAAACATGTTGGAGTTCTGCAAGAATGGGGATGTCCCTCAAACTTCGGAAACTGAAAGTATCCAAAAGCAATGTTGTAGTGCTCAGTCTTGTTGTGTGCCAGGTTTAGGAGTAAGCGATAACCCCTCTTGTGATGCTAGTTCTGCAGAGAGACCGATTGATACTATATTTAAATTCCATAAAGCTATACGTAAAGACTTGGAGTATTTAGATGTTGAATCTGGAAAGCTTAGTGATGGTGATGAGACAATTCTTCGTCAATTTACTGGAAGATTTCGCCTTTTATGGGGTTTACATAGAGCTCACAGTAATGCTGAAGATGACATAGTCTTTCCAGCACTGGAATCCAAAGAGGCACTTCATAATGTGAGTCATTCATACACGCTGGATCATAGGCAGGAGGAAAAATTATTCGAAGATATATCCTGTGTTCTTTCTGAGCTTTCTGTTCTTCGTGAAAGTCCGCAGAGATTCAATATGTCAGAGGACACTAGCCATTTTGAAACTTCTGATGCCACTGTGAGTGATAATATAGTAAACTATAATGAGTTAGCAACTAAACTTCAAGGGATGTGCAAATCCATAAGAGTCACCTTGCATCAGCATATTTTCAGAGAAGAGCGTGAGCTTTGGCCATTGTTTGGGAGACATTTCACTGTGGAAGAACAAGACAAGATAGTTGGCCGGATAATTGGAACTACTGGTGCTGAAGTACTCCAGTCGATGTTACCATGGGTAACTTCTGCACTGACTCAGGATGAACAGAACAAAATGATGGACACATGGAAGCAGGCTACTAAGAACACCATGTTCAATGAATGGCTTAATGAATGCTGGAAAGAGAGTCCATTGCCTATCCCACTGACGGAAGCATCAGAGCATAGCACGTCCCAAAGAGGTACTGAATATCAAGAAAGCGTGGACCTGAATGATCAGATCTTTAAGCCAGGTTGGAAAGACATATTCCGGATGAATCAAAGTGAGCTTGAGGCAGAGATACGGAAGGTTTATCGGGATTCTTCTCTGGACCCAAGGAGAAAGGCATATCTTGTGCAAAATCTAATGACGAGTCGCTGGATTGCTTCCCAGCAGAAGTTACCCAAAGGTGTTCCTGGAGAATCTTCTAATGGTGAAGAAATAGAAGGAAGATCACCATCATTTCGGGAGCCGGAGAAAAAAGAATTTGGATGTGAGCATTATAATAGAAACTGCAAACTTCGAGCTGCATGTTGTGGCAAGTTATTTACATGCAGATTTTGCCATGACAATGTGAGCGATCACTCAATGGATAGAAAGGTAACATCAGAAATGATGTGTATGCGCTGCTTGAATATACAAGCAGTTGGCCCCATATGCATGACCCCTTCGTGTGATGGACTTTCAATGGCAAAATATTATTGCAACATCTGCAAATTTTTCGATGATGAAAGGAATGTATATCATTGCCCATTTTGCAATGTATGCCGTGTTGGGAAAGGGCTTGGAATTGATTATTTTCATTGTATGAAATGCAATTGTTGTCTGGGGATTAAATCAGCATCTCACAAATGCTTGGAAAAAAGCTTGGAAATGAACTGTCCAATTTGTTGCGACTTCTTATTCACATCCAGTGCTACAGTCAGAGCTCTGCCTTGTGGCCATTATATGCATTCAACTTGCTTTCAGGCATACACTTGTAGTCACTACACATGTCCGATTTGCAGCAAGTCATTGGGAGATATGGCGGTTTACTTTGGTATGCTCGACGCTTTGTTGGCTGCTGAGGCGCTTCCTGGAGAGTACAAGGACCGACATCAGGATATACTGTGCAATGATTGTGATCGAAAGGGCTCTTCACGCTTCCACTGGTTATATCACAAATGTGGTTGTTGTGGCTCATACAATACCCGTGTGATCAAGTCCGAGGCAATAAATTCCATCTGCGACTAG 3630 0.4215 MATPMAGLQHLEGGGGVAVLSNSANKVDSSSPSTAASNGVLVYSELESPILIFLFFHKAIRNELDALHRLAMAFATGNCSDIQPLFERYHFVRSIYRHHSNAEDEVIFPALDIRVKNVAQTYSLEHKGESNLFDHLFELLNSNIQNDESFSKELASCTGALQTSVNQHMAKEEEQVFPLLIEKFSIDEQASLVWQFLCSIPVNTMTEFLPWLSTSISSDESIDLQKCLSKIVPGEKLLQKVIFTWMEGRSGVNTVESCAHHSHVRCSPSPLTHLIGTASCACEPATTGKRKHPESILDGSDATGTHPIDEILLWHNAIKRELSEIVVETRKIQLSGNFTNLSAFNERLQFIAEVCIFHSIAEDKVIFPAVDGELSFFQEHAEEESQFNEFRRLIEGIQSEGATSNSEAEFYPKLCSYADHIVETIQRHFRNEEVQVLPLARKHFSFKKQRELLYQSLCMMPLKLIEGVLPWLVGSLTEDETKMFLKNMQLAAPPTDSALVTLFCGWVCKARKEGLCLFSSVPSFFPARNLGGTENNRFQSSCACASALSSNGCPVSAESDENKKLVKQNMLEFCKNGDVPQTSETESIQKQCCSAQSCCVPGLGVSDNPSCDASSAERPIDTIFKFHKAIRKDLEYLDVESGKLSDGDETILRQFTGRFRLLWGLHRAHSNAEDDIVFPALESKEALHNVSHSYTLDHRQEEKLFEDISCVLSELSVLRESPQRFNMSEDTSHFETSDATVSDNIVNYNELATKLQGMCKSIRVTLHQHIFREERELWPLFGRHFTVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQDEQNKMMDTWKQATKNTMFNEWLNECWKESPLPIPLTEASEHSTSQRGTEYQESVDLNDQIFKPGWKDIFRMNQSELEAEIRKVYRDSSLDPRRKAYLVQNLMTSRWIASQQKLPKGVPGESSNGEEIEGRSPSFREPEKKEFGCEHYNRNCKLRAACCGKLFTCRFCHDNVSDHSMDRKVTSEMMCMRCLNIQAVGPICMTPSCDGLSMAKYYCNICKFFDDERNVYHCPFCNVCRVGKGLGIDYFHCMKCNCCLGIKSASHKCLEKSLEMNCPICCDFLFTSSATVRALPCGHYMHSTCFQAYTCSHYTCPICSKSLGDMAVYFGMLDALLAAEALPGEYKDRHQDILCNDCDRKGSSRFHWLYHKCGCCGSYNTRVIKSEAINSICD 1209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1576g00091 1209 MobiDBLite consensus disorder prediction 932 957 - -
Pral1576g00091 1209 SUPERFAMILY Zinc hairpin stack 1030 1086 IPR037275 -
Pral1576g00091 1209 CDD RING-H2_Pirh2-like 1092 1135 - -
Pral1576g00091 1209 CDD Hr-like 309 438 - -
Pral1576g00091 1209 Pfam Hemerythrin HHE cation binding domain 306 440 IPR012312 -
Pral1576g00091 1209 Pfam Hemerythrin HHE cation binding domain 619 780 IPR012312 -
Pral1576g00091 1209 Pfam Hemerythrin HHE cation binding domain 54 180 IPR012312 -
Pral1576g00091 1209 SUPERFAMILY RING/U-box 1090 1145 - -
Pral1576g00091 1209 Pfam Ring finger domain 1092 1134 IPR001841 -
Pral1576g00091 1209 Pfam CHY zinc finger 964 1039 IPR008913 GO:0008270
Pral1576g00091 1209 FunFam Zinc finger protein BRUTUS 614 844 - -
Pral1576g00091 1209 SMART ring_2 1093 1134 IPR001841 -
Pral1576g00091 1209 Pfam Zinc-ribbon 1140 1197 IPR039512 -
Pral1576g00091 1209 ProSiteProfiles Zinc finger RING-type profile. 1093 1135 IPR001841 -
Pral1576g00091 1209 ProSiteProfiles Zinc finger CTCHY-type profile. 1029 1092 IPR017921 -
Pral1576g00091 1209 SUPERFAMILY CHY zinc finger-like 958 1020 IPR037274 GO:0008270
Pral1576g00091 1209 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1086 1137 IPR013083 -
Pral1576g00091 1209 Gene3D - 1164 1206 - -
Pral1576g00091 1209 Gene3D nmb1532 protein domain like 613 852 - -
Pral1576g00091 1209 CDD Hr-like 52 178 - -
Pral1576g00091 1209 Gene3D nmb1532 protein domain like 309 456 - -
Pral1576g00091 1209 Gene3D nmb1532 protein domain like 47 198 - -
Pral1576g00091 1209 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 662 1202 - -
Pral1576g00091 1209 FunFam Zinc finger protein-related isoform 1 1088 1137 - -
Pral1576g00091 1209 CDD Hr-like 621 779 - -
Pral1576g00091 1209 ProSiteProfiles Zinc finger CHY-type profile. 957 1026 IPR008913 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1576g00091 Pral-Chr1576 475389 484004 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1576g00091 1 1208 C2H2 Transcription Factor Family AT3G18290 64.968 0.0 1610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1576g00091 K16276 - gmx:100791354 2001.87