Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1576g00089 ATGGCGACCAAGCGGTTCTTTGATGACTCTGATGATCAAGACCCAGATGAGCCCCCTCACCAACGCGTCAGGCCCACTCTTGCTTCGGTGATAGGAGAAGTAGTCATGGTGAAAAACTTGCAGAACCTTCTGTCGGGCTTGGAACCTTTGCTCAGAAGGGTGGTGAGTGAGGAGGTGGAGGGAGTTATGAGACGCATGTATCCGAGATCTATGATGACCAGGTCTGCATCGCTGAGGATACAAGCAGCAGAAGAAGCACCAAACCTAGAACTGAGCTTTAAGGAAAAGCTGAGTCTCCCCATATTCACGGGAAGCAGGATACAAGACATTAATGGGAACCCAATCCAGGTCGTTCTTGTAGACAAAAGCGGCAATCGAAGGGTTCCCACGAGCGTGCATTATCCCATGAAGCTTGAAGTTGTGGTTCTGGATGGAGATTTCCCACCTGCTGATAAGCAGGAATGGACGAGCAACGAATTCAGCGACCACATAGTGAAGGAGAGAGCTGGGAAGCGACCCTTGCTGGCTGGAGAACTCAACATGACCATGAGAAATGGGATTGCATGTCTGGGAGGGGATATTGAGTTTACGGATAACTCTAGCTGGATCAGGAGTAGGAAGTTCAGAGTGGCTGTCAGAGTTGTTCCTGGGACCAATCCAGGCCCTAGGGTTCTTGAAGGCTTCACTGAACCTTTTGTCGTCAAGGATCATCGAGGCGAATTGTATAAAAAACACCATCCTCCAGTGTTGGAAGACGAAGTGTGGCGGCTGGAGAAGATTGGGAAGGATGGGGCATTTCACAGGAAGTTGTCCGCAAATGGTATTAACAATGTTCAGGAGTTTCTCAAGCTGTCTGTGGTCGACCCTGCCAGACTCAGAGAGATATTAGGGATAGGGATGTCAGAGAAGATGTGGGAAGCGACGTTGAAGCATGCGAGGAGTTGTAAGATGGAGAACAAGCTCTACATATACCGTGGGCCTCACTTTGCGGTGTTTCTGAATCCCATATGCCAACTGGTCAGAGCTGAGATCAACGGCCACGTCCTCCATGGAAGAGACCTCAACAACATTAACAGGAGCTATGTTGAGAAGCTGGTAAGAGAAGCATACGCCCGATGGGATACCTTGGAGGAAGCAGCGCCTGAAGGGCTTTTGAGCGATAACGTTTCCTTGTTAGCTCAAGGGGAAACAGTGGATCAAATTGCAGAGAACCTTCCAATGAGTTGCGATCTCTTTGGAGATAAATCAGCACAAGAGGCCAGCTATGGAGGAGTGGCAGCTGGAGGCAGTGAGTGGTCGACGTTGAATTCGAACCCAGCATATCCCACCGTAGTGGGCAATACCTTTCCTTTCAGCTTCTCGGAGTCACAATCAGAAGTTGATAATATGACGCCTTCAGGCTCTGTCATCCATGGATCTCCCAAGTGGTCCTAA 1434 0.4958 MATKRFFDDSDDQDPDEPPHQRVRPTLASVIGEVVMVKNLQNLLSGLEPLLRRVVSEEVEGVMRRMYPRSMMTRSASLRIQAAEEAPNLELSFKEKLSLPIFTGSRIQDINGNPIQVVLVDKSGNRRVPTSVHYPMKLEVVVLDGDFPPADKQEWTSNEFSDHIVKERAGKRPLLAGELNMTMRNGIACLGGDIEFTDNSSWIRSRKFRVAVRVVPGTNPGPRVLEGFTEPFVVKDHRGELYKKHHPPVLEDEVWRLEKIGKDGAFHRKLSANGINNVQEFLKLSVVDPARLREILGIGMSEKMWEATLKHARSCKMENKLYIYRGPHFAVFLNPICQLVRAEINGHVLHGRDLNNINRSYVEKLVREAYARWDTLEEAAPEGLLSDNVSLLAQGETVDQIAENLPMSCDLFGDKSAQEASYGGVAAGGSEWSTLNSNPAYPTVVGNTFPFSFSESQSEVDNMTPSGSVIHGSPKWS 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1576g00089 477 MobiDBLite consensus disorder prediction 1 21 - -
Pral1576g00089 477 MobiDBLite consensus disorder prediction 457 477 - -
Pral1576g00089 477 Pfam Calmodulin binding protein C-terminal domain 320 378 IPR046829 -
Pral1576g00089 477 MobiDBLite consensus disorder prediction 457 471 - -
Pral1576g00089 477 PANTHER OS02G0177800 PROTEIN 1 422 IPR012416 GO:0005516
Pral1576g00089 477 MobiDBLite consensus disorder prediction 1 23 - -
Pral1576g00089 477 Pfam Calmodulin binding protein central domain 250 315 IPR046830 -
Pral1576g00089 477 Pfam Calmodulin binding protein-like N-terminal domain 89 237 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1576g00089 Pral-Chr1576 458188 461407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1576g00089 3 385 Calmodulin-binding Proteins AT5G57580 47.938 1.30e-115 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1576g00089 - - aip:107644281 537.339