Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1576g00081 ATGGATTCACCAACCCCCTCAGTGCGGACTCCCCGTCGTCCCAGCGGTTCCTGGTCTCATGGTTCTCACCAAATACCCAGTCGGCCTCAGGACAAGCTCCGCCTTATGTGCAGTTACGGTGGACGAATCGTCCCCCGCCCACATGACAGGTCCCTCTGCTACGTCGGCGGTGACACCCGTATCGCAGTGGTCCATCGCCATTCTTCCCTCACAGAAGTCTGTCTTCGGCTCTCTCGTACTCTCCTCCACGGCCGACCTTTCATCCTCAAGTATCTTCTTCCCGGTGAGGACTTTGACGGTCTCATTTCAATAATCCACGACGAAGACCTCCAGCTGATGATCCAAGAGTATGATCGTGTAACTGCGGCCTCGCCTCTCATCAAACCTTTGCGTCTGAGGCTGTTCTTGTTCCGTTTTGAGCCAGAGATCACTGCTATTTCAATCCACGACGCCGATCAAGAGTTCATGGACGCTAGCCATGACTACTCTGGGATTCTCTCTCGGCTCGGGTCAGATGCTTCCGCCGTTGATTGCTCAGCGAAACCTGACGGGTTTCCCAAGAATGACTCTGGCACTGATTTGGAGGCTTTGGCTGTGAATCACAACAATAAACAGATGAAGAGTTTGGACGACGTTAATACGGTATCGGACTTACTTGTGGCGGACACATCGCCTTCTGGGTCTCTTTCCTCGTCGCCTTCCATATTCAGTCTGCCTCCACTTGGAGTCGATGATAGTGGCGGCCGACCGAAGCAAGAAAAGCCCGAGATGGAGGAGCTGTTTGTCCAATTGAACTTTGCTACGAATGTCATGACGAAGCAAGAAGATGGGTGTGCTGCTGCTTCCTCGGCTGCGTTGGCACCACCAGTGATGGTCCCTTCTCCGTTGCAGCTTGTGCATGCAAGAACCAGTGACGCTTTAAGTTTGCTTTCTCCTTATCCAATTGCGAGTTATTTGTCAAAGGCTGTTCACTTGCAAGAGCAAGTAAAAGCGGGCCATGCAAATATGAGGAGTGAAATATCTGATACTAGCCCTGCAATCCAAATGGATCAAGTTGAAGAATGCGCATACAGGTTAGGCTCACAAGTGGATCGAAATCATCAAATTGAGCAATTTGTCCATTACGTAGCAATCCCATCCTACTACCCAGTCTATGCAATAACTGTGGCACCTACTCATCCAGATGGGGTATCCTCAGGGCAGCCACGGACAGTAACAGCCCAAAGCGGGCCTCCTTCAACGGTTTACATCAATCCCACTTCAAGTCTTTACACAGCATCAAGTCCTGCAATTCTTCAACCTGCCCAGTTCCGTTGCCCCGTACAGTCTAATATTGCTTTTGCTTCTACCAGTCCTGGCTTTGAATACGATGGTACTGCCACTTTCCAAAAACAAACTAACACTCATTTGCCCCCTCACTACCCATCCATGACCCCACCAAGATCGTCGGATGCTTTCAGGCATAACATTCGGTAG 1476 0.5061 MDSPTPSVRTPRRPSGSWSHGSHQIPSRPQDKLRLMCSYGGRIVPRPHDRSLCYVGGDTRIAVVHRHSSLTEVCLRLSRTLLHGRPFILKYLLPGEDFDGLISIIHDEDLQLMIQEYDRVTAASPLIKPLRLRLFLFRFEPEITAISIHDADQEFMDASHDYSGILSRLGSDASAVDCSAKPDGFPKNDSGTDLEALAVNHNNKQMKSLDDVNTVSDLLVADTSPSGSLSSSPSIFSLPPLGVDDSGGRPKQEKPEMEELFVQLNFATNVMTKQEDGCAAASSAALAPPVMVPSPLQLVHARTSDALSLLSPYPIASYLSKAVHLQEQVKAGHANMRSEISDTSPAIQMDQVEECAYRLGSQVDRNHQIEQFVHYVAIPSYYPVYAITVAPTHPDGVSSGQPRTVTAQSGPPSTVYINPTSSLYTASSPAILQPAQFRCPVQSNIAFASTSPGFEYDGTATFQKQTNTHLPPHYPSMTPPRSSDAFRHNIR 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1576g00081 491 PANTHER OS05G0427100 PROTEIN-RELATED 23 406 - -
Pral1576g00081 491 MobiDBLite consensus disorder prediction 1 26 - -
Pral1576g00081 491 SMART PB1_new 47 137 IPR000270 GO:0005515
Pral1576g00081 491 Pfam PB1 domain 50 137 IPR000270 GO:0005515
Pral1576g00081 491 MobiDBLite consensus disorder prediction 468 491 - -
Pral1576g00081 491 CDD PB1_UP2 36 128 - -
Pral1576g00081 491 MobiDBLite consensus disorder prediction 1 29 - -
Pral1576g00081 491 SUPERFAMILY CAD & PB1 domains 48 140 - -
Pral1576g00081 491 MobiDBLite consensus disorder prediction 223 253 - -
Pral1576g00081 491 MobiDBLite consensus disorder prediction 223 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1576g00081 Pral-Chr1576 424730 426389 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1576g00081 32 183 MAP Kinase Kinase Kinase AT1G79570 33.742 2.17e-21 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1576g00081 - - qsa:O6P43_008537 262.692