Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1576g00055 ATGGCTTCTCAAAAGAAGGTAGAAGCAGAGTTTTTCACCGAATATGGAGAGGCAAGTAGATACCAGGTTCAAGAAGTCATTGGTAAAGGAAGTTATGGCGTTGTGGGTTCTGCTATTGACACCAATACTGGTGAAAAGGTTGCAATAAAGAAGATTAATGATGTTTTTGAGCATGTCTCAGATGCCACGAGGATCCTAAGAGAAATTAAACTCCTTCGATTGCTCAAACATCCTGATATCGTAGAAATTAAGCATATCATGCTTCCTCCATCTCGACGAGAGTTCAGGGATATCTATGTCGTGTTTGAACTGATGGAGTCTGACCTTCATCAAGTAATAAAGGCAAATGATGATCTTACTCCGGAGCATCACCAATTTTTCTTGTACCAACTTCTTCGAGGACTGAAATATATACATACTGCTAATGTGTTTCACCGTGACTTAAAGCCGAAAAATATTCTTGCTAATGCCGATTGCAAACTAAAGATATGTGATTTTGGGCTTGCTCGAGTTTCATTTAATGATGCTCCATCAACAATATTCTGGACGGACTATGTTGCAACTCGGTGGTATCGTGCCCCTGAACTATGTGGTTCATTTTTCTCAAAATATACCGCTGCAATTGATATTTGGAGCATTGGATGCATTTTTGCAGAAATTCTCTTGGGGAAGCCATTGTTTCCTGGGAAAAATGTGGTGAACCAGTTGGATCTCATAACTGATTTACTTGGGACTCCTCCTCCTGAATCCATTGCCAGGATTCGAAATGAGAAGGCTAGAAGGTATCTTAGTGGCATGCGTAAAAAGAAACCTGTTCCATTTCCCCAAAAGTTCCCTAATGCCGATCCATTGGCTCTTCGTTTGCTCCAGCGTCTGCTTGCATTTGATCCTAAGGATCGTCCAACTGCTGAAGAGGCATTAACTGATCCTTACTTCAAAGGTTTATCGAATGTGGATCGCGAACCATCCACTCAACCCATTTCAAAACTTGAGTTTGAGTTTGAGAGGAGAAAATTGACTAAAGATGACGTTAGAGAGTTGATTTATCGAGAGATTCTAGAGTATCATCCGCAGATGCTCGACGAGTATCTTTCCGGTGGAGAGCAGACCAGTTTTATGTATCCAAGTGGGGTTGATCGGTTCAAGCGACAGTTTGCGCATCTTGAAGAGCATTATGGCAAAGGTGAGAGGGGCATGCCATTGCTGAGACAGCAGGCCTCCCTACCTCGAGAGCGAGTTTGTGCAGCCAAGGATGAAAAGAATGAAGGGGAGGATTCTGAAAAGCGCATGGCAGCTGGTGTTGGAACAACTGTTGAGGGTGCTCCCAGGTCTAACGGGACAGATGCTGATTATCAAAATGGTCCCGCCAAGCCCAACTCCAATGCCAATACGCGTAGCTTGTTCAAGAGTGCCAGCATTAGTGCATCCAAGTGCGTAGGTGTGAAACCACGCGACAACCTCAAGGAGGAACCGATTGAGGAGGTGAGTGATGAAACAGTAGATGAGATGACTCAGAAGATGGATGTCCTCAATGCTTAG 1539 0.4379 MASQKKVEAEFFTEYGEASRYQVQEVIGKGSYGVVGSAIDTNTGEKVAIKKINDVFEHVSDATRILREIKLLRLLKHPDIVEIKHIMLPPSRREFRDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSTIFWTDYVATRWYRAPELCGSFFSKYTAAIDIWSIGCIFAEILLGKPLFPGKNVVNQLDLITDLLGTPPPESIARIRNEKARRYLSGMRKKKPVPFPQKFPNADPLALRLLQRLLAFDPKDRPTAEEALTDPYFKGLSNVDREPSTQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLDEYLSGGEQTSFMYPSGVDRFKRQFAHLEEHYGKGERGMPLLRQQASLPRERVCAAKDEKNEGEDSEKRMAAGVGTTVEGAPRSNGTDADYQNGPAKPNSNANTRSLFKSASISASKCVGVKPRDNLKEEPIEEVSDETVDEMTQKMDVLNA 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1576g00055 512 FunFam Mitogen-activated protein kinase 10 115 - -
Pral1576g00055 512 Pfam Protein kinase domain 21 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1576g00055 512 ProSitePatterns Protein kinases ATP-binding region signature. 27 51 IPR017441 GO:0005524
Pral1576g00055 512 SUPERFAMILY Protein kinase-like (PK-like) 17 317 IPR011009 -
Pral1576g00055 512 ProSitePatterns MAP kinase signature. 56 159 IPR003527 GO:0004707|GO:0005524|GO:0006468
Pral1576g00055 512 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 20 362 - -
Pral1576g00055 512 SMART serkin_6 21 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1576g00055 512 Gene3D Transferase(Phosphotransferase) domain 1 107 335 - -
Pral1576g00055 512 CDD STKc_TDY_MAPK 20 357 - -
Pral1576g00055 512 FunFam Mitogen-activated protein kinase 336 358 - -
Pral1576g00055 512 MobiDBLite consensus disorder prediction 412 429 - -
Pral1576g00055 512 MobiDBLite consensus disorder prediction 406 468 - -
Pral1576g00055 512 MobiDBLite consensus disorder prediction 482 504 - -
Pral1576g00055 512 ProSiteProfiles Protein kinase domain profile. 21 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1576g00055 512 Gene3D Phosphorylase Kinase; domain 1 37 358 - -
Pral1576g00055 512 FunFam Mitogen-activated protein kinase 107 335 - -
Pral1576g00055 512 MobiDBLite consensus disorder prediction 440 468 - -
Pral1576g00055 512 MobiDBLite consensus disorder prediction 480 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1576g00055 Pral-Chr1576 298402 303407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1576g00055 7 512 MAP Kinase Gene Family AT3G18040 80.079 0.0 818
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Pral1576g00055 Pkinase 3e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1576g00055 - - zju:107434116 838.565