Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1576g00052 ATGAAGAACATTCTTAAGAAGCTTCATATCATGCCTAATCGATCAGAAGATGCAGCAGGATCTAATTCATCAAAAGGCCACAACTCCAATGATGGTTCATTCCCTAAGAAGCCATCAAACTCTCGCTCCCCTCAAAGCTCTGAGCATAAACCCTTTCCGGGGATTTCGAGCTGGTTGCACTTGGTTACTAACAGGCAGGGTCCCAGTCCTCCATCTTCGAATCTGAAGAGAGGAGAAAGAGTGGAAACATCTGATTTACTTAGCAGTGGCGGTTTGGATACTGTTTCTGATTCAGCGATGCGTGATTCTGGGTCTAGCAGTTCGAGGGATCCTGAAGTAGAGGAAGAGTATCAGATACAATTGGCTTTAGAGATGAGTGCAAAGGAGGATCCCGAGGCAGTGCAGATTGAGGCTGTTAAGCAGATCAGCTTGGGTTCTTGTGGCCCTGATAATACACCAGCTGAAGTTGTGGCATACAGATATTGGAATTACAATGCTCTTGGTTTTGATGACAAGATCTTGGATGGTTTCTATGATCTTTATGGGATCTTAAATGAGTCTCAGTCAACCACTGCAAGAATGCCTTCCCTGGTAGATCTGCAAGGGACACCAACCTCAGATATTGTCACTTGGGAAGCAGTCCTGGTCAATAGGGCTGCTGATTCAAATTTGTTGAAACTTGAGCAGAAAGCCCTGGAGTTGGTTGTCAAGTCAAGACCAGATTCTGAAGGAGTTATAAATAGCAATTTGGTGCAGAGGCTTGCCATATTAGTGGCTGACTACATGGGTGGACCGGTTACACATCCTGAAAGCATGACAAGAGCATGGAGGAGTCTTAGTTACAGTCTCAAAGCAACTCTTGGTAGCATGGTTTTGCCACTTGGCTCCTTGACCATTGGATTGGCTCGGCATCGTGCGTTGTTATTTAAGGTTTTATCTGATAGTGTGGGCATCCCATGCTGTTTGGTCAAAGGACTACATTACACAGGTTCTGATGATGTGGCCATGAACTTTGTCAAGGTTGACGGTGGAAGGGAATACATTGTTGACCTGATGGCAGATCCTGGAACACTTATTCCATCTGATGCACCTGGATCGCATAACGAGTATGATGAATCCTTTTTTGTGGGCAGTCCTTTGTCAAGGGACCTTGATTCCTCTCGGGTAGCGTCATCAAGCAGTGGGATTGGAAGTTCATCTGAAGAAGCTTCAGACTTTGGTACATTTGATAAAAGAAACATATCAAAACAGATTGCCTATTTGGGCAAAGAATCTTATGTAAGCAATCCCATTTTAGGTGAAGACGAATCAAAGAGCCCATTGAATGATGATTTCAGATGTCCCCCTAATGTGGAAAAGTTCACAATGCAGGGAGCTCCGAGTAGACTAAATCATCCCTACGCTCATGCAAGATCTCCTTCTTGGACTGAAGGGATCAGTTCCCCTGCAGTACGTAGGATGAAAGTGAAAGATGTTTCACAATATATGATAGATGCTGCAAAGGGGAATCCTCAGTTAGCTCAAAAACTTCACGATGTTTTACTTGAAAGTGGTGTTGTTGCTCCTCCAAACTTGTTTTCTGAAACTTATCATGAGCAGTTAGGTGCCCCAATTGTTGAGACTAACTCCAACACTGAGGAAAACGAATATGAACGGGAGTGTGGGAACCTGGAAGCTCAGGCTGCTTCCCACCGAAGTCTTGCTCAATTCTTGCCTCCTTTGCCTCCCTACAGAGCTCATCTTAAAGCAACTCCTAGCAGTCAGCTGGAGCATTCTAAGCCTGTAGAAGGTTTAGGGATCAACCTTCCTTTTGATCCTAAGGAAGCAGCTGGACAGCGCCTACAATCACATGCAGAAGCAACTCCTATAAGATATGGGAAAAATGTACCAGTTGCTGCAGCTGCAGCAGCAGCTGCAGCTGTTGTTGCTTCATCAATGGTAGTTGCCGTGGCAAGGTCAAGTACTGACTCAACTATTGAGCTTCCTGTGGCAGCAGCTGCTACTGCTACTGCTGCAGCTGTAGTAGCAACCACTGCGGCTGTTGGTAAGGGAAGTCGGAGTGATGGAGATTCAGATGGTGCTTTTTATGAACAGAAGGGTAGTGATCATGGAGAACATAGTGGTTTAGGAGCAAACTCAGAAGGATCATATGGGGAGGTGTACCGGGGTGAATGGCATGGAACTGAAGTCGCTGTAAAGAGATTTTTGGATCAAGACATCTATGGTGAATCTCTTGAGGAATTCATAAGTGAGGTCCGAATAATGAAAAGGCTCAGGCATCCAAATGTTGTCCTCTTCATGGGAGCTATAACTAAACCTCCAAATCTTTCCATTGTCACAGAATTTCTTCCCAGAGGAAGTTTGTATAGATTAATCCACCGGCCTAACAATCAATTAGACGAGCGAAGACGACTGAGGATGGCCCTAGATGCTGCACGAGGAATGAACTATTTGCATAACTGCTCTCCAGTGATAGTCCATCGTGATTTGAAGTCTCCAAATCTTCTTGTTGACAAAAACTGGGTTGTGAAGGTATGCGACTTTGGTTTATCACGAGTGAAGCACAGTACATTCCTTTCCTCAAGATCAACTGCAGGAACAGCAGAGTGGATGGCTCCAGAAATGTTGAGAAATGAGCCTTCAAACGAAAAGTGCGATGTTTTCAGTTTTGGGGTCATATTATGGGAGCTCTCTACGATGCGGCAACCCTGGGGAGGAATGAATCCAATGCAAGTTGTTGGTGCTGTGGGTTTCCAACATCGCCGACTTGAAATCCCAGATGATATGGACCCTGCCATTGCGGACATTATCAGAAAATGCTGGCAGACAGATCCAAAGTTGAGACCGAGCTTTGCTGAAATAATGGCAGCTCTGAAGCCATTGCAGAAGCCAATAATTAGTTCGCAAGTGCAAAGAACGATCGGAGGACATGAAAAGGCTCAGTCATCAGGAGCTGCACAAGAGCCAACTGGATAG 2976 0.4516 MKNILKKLHIMPNRSEDAAGSNSSKGHNSNDGSFPKKPSNSRSPQSSEHKPFPGISSWLHLVTNRQGPSPPSSNLKRGERVETSDLLSSGGLDTVSDSAMRDSGSSSSRDPEVEEEYQIQLALEMSAKEDPEAVQIEAVKQISLGSCGPDNTPAEVVAYRYWNYNALGFDDKILDGFYDLYGILNESQSTTARMPSLVDLQGTPTSDIVTWEAVLVNRAADSNLLKLEQKALELVVKSRPDSEGVINSNLVQRLAILVADYMGGPVTHPESMTRAWRSLSYSLKATLGSMVLPLGSLTIGLARHRALLFKVLSDSVGIPCCLVKGLHYTGSDDVAMNFVKVDGGREYIVDLMADPGTLIPSDAPGSHNEYDESFFVGSPLSRDLDSSRVASSSSGIGSSSEEASDFGTFDKRNISKQIAYLGKESYVSNPILGEDESKSPLNDDFRCPPNVEKFTMQGAPSRLNHPYAHARSPSWTEGISSPAVRRMKVKDVSQYMIDAAKGNPQLAQKLHDVLLESGVVAPPNLFSETYHEQLGAPIVETNSNTEENEYERECGNLEAQAASHRSLAQFLPPLPPYRAHLKATPSSQLEHSKPVEGLGINLPFDPKEAAGQRLQSHAEATPIRYGKNVPVAAAAAAAAAVVASSMVVAVARSSTDSTIELPVAAAATATAAAVVATTAAVGKGSRSDGDSDGAFYEQKGSDHGEHSGLGANSEGSYGEVYRGEWHGTEVAVKRFLDQDIYGESLEEFISEVRIMKRLRHPNVVLFMGAITKPPNLSIVTEFLPRGSLYRLIHRPNNQLDERRRLRMALDAARGMNYLHNCSPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRVKHSTFLSSRSTAGTAEWMAPEMLRNEPSNEKCDVFSFGVILWELSTMRQPWGGMNPMQVVGAVGFQHRRLEIPDDMDPAIADIIRKCWQTDPKLRPSFAEIMAALKPLQKPIISSQVQRTIGGHEKAQSSGAAQEPTG 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1576g00052 991 ProSitePatterns Serine/Threonine protein kinases active-site signature. 825 837 IPR008271 GO:0004672|GO:0006468
Pral1576g00052 991 MobiDBLite consensus disorder prediction 690 704 - -
Pral1576g00052 991 Pfam Ethylene-responsive protein kinase Le-CTR1 154 359 - -
Pral1576g00052 991 SUPERFAMILY Protein kinase-like (PK-like) 714 957 IPR011009 -
Pral1576g00052 991 Pfam Protein tyrosine and serine/threonine kinase 714 958 IPR001245 GO:0004672|GO:0006468
Pral1576g00052 991 Gene3D Phosphorylase Kinase; domain 1 710 783 - -
Pral1576g00052 991 FunFam Serine/threonine-protein kinase isoform 1 710 784 - -
Pral1576g00052 991 CDD STKc_MAP3K-like 714 958 - -
Pral1576g00052 991 FunFam Serine/threonine-protein kinase CTR1 785 968 - -
Pral1576g00052 991 PRINTS Tyrosine kinase catalytic domain signature 819 837 IPR001245 GO:0004672|GO:0006468
Pral1576g00052 991 PRINTS Tyrosine kinase catalytic domain signature 929 951 IPR001245 GO:0004672|GO:0006468
Pral1576g00052 991 PRINTS Tyrosine kinase catalytic domain signature 866 876 IPR001245 GO:0004672|GO:0006468
Pral1576g00052 991 PRINTS Tyrosine kinase catalytic domain signature 885 907 IPR001245 GO:0004672|GO:0006468
Pral1576g00052 991 PRINTS Tyrosine kinase catalytic domain signature 780 793 IPR001245 GO:0004672|GO:0006468
Pral1576g00052 991 Gene3D Transferase(Phosphotransferase) domain 1 785 970 - -
Pral1576g00052 991 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 114 133 IPR003903 -
Pral1576g00052 991 MobiDBLite consensus disorder prediction 16 52 - -
Pral1576g00052 991 ProSiteProfiles Protein kinase domain profile. 706 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1576g00052 991 MobiDBLite consensus disorder prediction 59 77 - -
Pral1576g00052 991 SMART serkin_6 714 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1576g00052 991 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 201 967 - -
Pral1576g00052 991 MobiDBLite consensus disorder prediction 1 115 - -
Pral1576g00052 991 MobiDBLite consensus disorder prediction 969 991 - -
Pral1576g00052 991 MobiDBLite consensus disorder prediction 87 106 - -
Pral1576g00052 991 MobiDBLite consensus disorder prediction 681 713 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1576g00052 Pral-Chr1576 273662 282018 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1576g00052 1 974 MAP Kinase Kinase Kinase AT1G73660 60.588 0.0 1090
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pral1576g00052 PK_Tyr_Ser-Thr 2.4e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1576g00052 - - qsa:O6P43_005170 1338.17