Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1576g00051 ATGAAGAACATTCTTAAGAAGCTTCATATCATGCCTAATCGATCAGAAGATGCAGCAGGATCTAATTCATCAAAAGGCCACAACTCCAATGATGGTTCATTCCCTAAGAAGCCATCAAACTCTCGCTCCCCTCAAAGCTCTGAGCATAAACCCTTTCCGGGGATTTCGAGCTGGTTGCACTTGGTTACTAACAGGCAGGGTCCCAGTCCTCCATCTTCGAATCTGAAGAGAGGAGAAAGAGTGGAAACATCTGATTTACTTAGCAGTGGCGGTTTGGATACTGTTTCTGATTCAGCGATGCGTGATTCTGGGTCTAGCAGTTCGAGGGATCCTGAAGTAGAGGAAGAGTATCAGATACAATTGGCTTTAGAGATGAGTGCAAAGGAGGATCCCGAGGCAGTGCAGATTGAGGCTGTTAAGCAGATCAGCTTGGGTTCTTGTGGCCCTGATAATACACCAGCTGAAGTTGTGGCATACAGATATTGGAATTACAATGCTCTTGGTTTTGATGACAAGATCTTGGATGGTTTCTATGATCTTTATGGGATCTTAAATGAGTCTCAGTCAACCACTGCAAGAATGCCTTCCCTGGTAGATCTGCAAGGGACACCAACCTCAGATATTGTCACTTGGGAAGCAGTCCTGGTCAATAGGGCTGCTGATTCAAATTTGTTGAAACTTGAGCAGAAAGCCCTGGAGTTGGTTGTCAAGTCAAGACCAGATTCTGAAGGAGTTATAAATAGCAATTTGGTGCAGAGGCTTGCCATATTAGTGGCTGACTACATGGGTGGACCGGTTACACATCCTGAAAGCATGACAAGAGCATGGAGGAGTCTTAGTTACAGTCTCAAAGCAACTCTTGGTAGCATGGTTTTGCCACTTGGCTCCTTGACCATTGGATTGGCTCGGCATCGTGCGTTGTTATTTAAGGTTTTATCTGATAGTGTGGGCATCCCATGCTGTTTGGTCAAAGGACTACATTACACAGGTTCTGATGATGTGGCCATGAACTTTGTCAAGGTTGACGGTGGAAGGGAATACATTGTTGACCTGATGGCAGATCCTGGAACACTTATTCCATCTGATGCACCTGGATCGCATAACGAGTATGATGAATCCTTTTTTGTGGGCAGTCCTTTGTCAAGGGACCTTGATTCCTCTCGGGTAGCGTCATCAAGCAGTGGGATTGGAAGTTCATCTGAAGAAGCTTCAGACTTTGGTACATTTGATAAAAGAAACATATCAAAACAGATTGCCTATTTGGGCAAAGAATCTTATGGAGCTCCGAGTAGACTAAATCATCCCTACGCTCATGCAAGATCTCCTTCTTGGACTGAAGGGATCAGTTCCCCTGCAGTACGTAGGATGAAAGTGAAAGATGTTTCACAATATATGATAGATGCTGCAAAGGGGAATCCTCAGTTAGCTCAAAAACTTCACGATGTTTTACTTGAAAGTGGTGTTGTTGCTCCTCCAAACTTGTTTTCTGAAACTTATCATGAGCAGTTAGGTGCCCCAATTGTTGAGACTAACTCCAACACTGAGGAAAACGAATATGAACGGGAGTGTGGGAACCTGGAAGCTCAGGCTGCTTCCCACCGAAGTCTTGCTCAATTCTTGCCTCCTTTGCCTCCCTACAGAGCTCATCTTAAAGCAACTCCTAGCAGTCAGCTGGAGCATTCTAAGCCTGTAGAAGGTTTAGGGATCAACCTTCCTTTTGATCCTAAGGAAGCAGCTGGACAGCGCCTACAATCACATGCAGAAGCAACTCCTATAAGATATGGGAAAAATGTACCAGTTGCTGCAGCTGCAGCAGCAGCTGCAGCTGTTGTTGCTTCATCAATGGTAGTTGCCGTGGCAAGGTCAAGTACTGACTCAACTATTGAGCTTCCTGTGGCAGCAGCTGCTACTGCTACTGCTGCAGCTGTAGTAGCAACCACTGCGGCTGTTGGTAAGGGAAGTCGGAGTGATGGAGATTCAGATGGTGCTTTTTATGAACAGAAGGGTAGTGATCATGGAGAACATAGTGGTTTAGGAGCAAACTCAGAAGGTGAGAGAATATCTGACAGATCAATAAGTAATGATAGTACAAAATCTGATTCCGCACTAGATGATGTTGCTGAGTATGAAATTCCATGGGAGGATATCACACTGGGTGAGCGTATTGGGCTTGGATCATATGGGGAGGTGTACCGGGGTGAATGGCATGGAACTGAAGTCGCTGTAAAGAGATTTTTGGATCAAGACATCTATGGTGAATCTCTTGAGGAATTCATAAGTGAGGTCCGAATAATGAAAAGGCTCAGGCATCCAAATGTTGTCCTCTTCATGGGAGCTATAACTAAACCTCCAAATCTTTCCATTGTCACAGAATTTCTTCCCAGAGGAAGTTTGTATAGATTAATCCACCGGCCTAACAATCAATTAGACGAGCGAAGACGACTGAGGATGGCCCTAGATGCTGCACGAGGAATGAACTATTTGCATAACTGCTCTCCAGTGATAGTCCATCGTGATTTGAAGTCTCCAAATCTTCTTGTTGACAAAAACTGGGTTGTGAAGGTATGCGACTTTGGTTTATCACGAGTGAAGCACAGTACATTCCTTTCCTCAAGATCAACTGCAGGAACAGCAGAGTGGATGGCTCCAGAAATGTTGAGAAATGAGCCTTCAAACGAAAAGTGCGATGTTTTCAGTTTTGGGGTCATATTATGGGAGCTCTCTACGATGCGGCAACCCTGGGGAGGAATGAATCCAATGCAAGTTGTTGGTGCTGTGGGTTTCCAACATCGCCGACTTGAAATCCCAGATGATATGGACCCTGCCATTGCGGACATTATCAGAAAATGCTGGCAGACAGATCCAAAGTTGAGACCGAGCTTTGCTGAAATAATGGCAGCTCTGAAGCCATTGCAGAAGCCAATAATTAGTTCGCAAGTGCAAAGAACGATCGGAGGACATGAAAAGGCTCAGTCATCAGGAGCTGCACAAGAGCCAACTGGATAG 3006 0.4511 MKNILKKLHIMPNRSEDAAGSNSSKGHNSNDGSFPKKPSNSRSPQSSEHKPFPGISSWLHLVTNRQGPSPPSSNLKRGERVETSDLLSSGGLDTVSDSAMRDSGSSSSRDPEVEEEYQIQLALEMSAKEDPEAVQIEAVKQISLGSCGPDNTPAEVVAYRYWNYNALGFDDKILDGFYDLYGILNESQSTTARMPSLVDLQGTPTSDIVTWEAVLVNRAADSNLLKLEQKALELVVKSRPDSEGVINSNLVQRLAILVADYMGGPVTHPESMTRAWRSLSYSLKATLGSMVLPLGSLTIGLARHRALLFKVLSDSVGIPCCLVKGLHYTGSDDVAMNFVKVDGGREYIVDLMADPGTLIPSDAPGSHNEYDESFFVGSPLSRDLDSSRVASSSSGIGSSSEEASDFGTFDKRNISKQIAYLGKESYGAPSRLNHPYAHARSPSWTEGISSPAVRRMKVKDVSQYMIDAAKGNPQLAQKLHDVLLESGVVAPPNLFSETYHEQLGAPIVETNSNTEENEYERECGNLEAQAASHRSLAQFLPPLPPYRAHLKATPSSQLEHSKPVEGLGINLPFDPKEAAGQRLQSHAEATPIRYGKNVPVAAAAAAAAAVVASSMVVAVARSSTDSTIELPVAAAATATAAAVVATTAAVGKGSRSDGDSDGAFYEQKGSDHGEHSGLGANSEGERISDRSISNDSTKSDSALDDVAEYEIPWEDITLGERIGLGSYGEVYRGEWHGTEVAVKRFLDQDIYGESLEEFISEVRIMKRLRHPNVVLFMGAITKPPNLSIVTEFLPRGSLYRLIHRPNNQLDERRRLRMALDAARGMNYLHNCSPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRVKHSTFLSSRSTAGTAEWMAPEMLRNEPSNEKCDVFSFGVILWELSTMRQPWGGMNPMQVVGAVGFQHRRLEIPDDMDPAIADIIRKCWQTDPKLRPSFAEIMAALKPLQKPIISSQVQRTIGGHEKAQSSGAAQEPTG 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1576g00051 1001 Gene3D Phosphorylase Kinase; domain 1 709 793 - -
Pral1576g00051 1001 SUPERFAMILY Protein kinase-like (PK-like) 699 967 IPR011009 -
Pral1576g00051 1001 ProSitePatterns Protein kinases ATP-binding region signature. 722 743 IPR017441 GO:0005524
Pral1576g00051 1001 Pfam Protein tyrosine and serine/threonine kinase 716 968 IPR001245 GO:0004672|GO:0006468
Pral1576g00051 1001 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 394 977 - -
Pral1576g00051 1001 FunFam Serine/threonine-protein kinase isoform 1 707 794 - -
Pral1576g00051 1001 ProSiteProfiles Protein kinase domain profile. 716 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1576g00051 1001 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 114 133 IPR003903 -
Pral1576g00051 1001 MobiDBLite consensus disorder prediction 16 52 - -
Pral1576g00051 1001 MobiDBLite consensus disorder prediction 386 405 - -
Pral1576g00051 1001 ProSitePatterns Serine/Threonine protein kinases active-site signature. 835 847 IPR008271 GO:0004672|GO:0006468
Pral1576g00051 1001 PRINTS Tyrosine kinase catalytic domain signature 829 847 IPR001245 GO:0004672|GO:0006468
Pral1576g00051 1001 PRINTS Tyrosine kinase catalytic domain signature 876 886 IPR001245 GO:0004672|GO:0006468
Pral1576g00051 1001 PRINTS Tyrosine kinase catalytic domain signature 790 803 IPR001245 GO:0004672|GO:0006468
Pral1576g00051 1001 PRINTS Tyrosine kinase catalytic domain signature 895 917 IPR001245 GO:0004672|GO:0006468
Pral1576g00051 1001 PRINTS Tyrosine kinase catalytic domain signature 939 961 IPR001245 GO:0004672|GO:0006468
Pral1576g00051 1001 MobiDBLite consensus disorder prediction 979 1001 - -
Pral1576g00051 1001 Pfam Ethylene-responsive protein kinase Le-CTR1 154 359 - -
Pral1576g00051 1001 CDD STKc_MAP3K-like 722 968 - -
Pral1576g00051 1001 FunFam Serine/threonine-protein kinase CTR1 795 978 - -
Pral1576g00051 1001 MobiDBLite consensus disorder prediction 659 673 - -
Pral1576g00051 1001 Gene3D Transferase(Phosphotransferase) domain 1 795 980 - -
Pral1576g00051 1001 MobiDBLite consensus disorder prediction 650 701 - -
Pral1576g00051 1001 MobiDBLite consensus disorder prediction 59 77 - -
Pral1576g00051 1001 MobiDBLite consensus disorder prediction 386 404 - -
Pral1576g00051 1001 MobiDBLite consensus disorder prediction 1 115 - -
Pral1576g00051 1001 SMART serkin_6 716 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1576g00051 1001 MobiDBLite consensus disorder prediction 87 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1576g00051 Pral-Chr1576 273662 282018 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1576g00051 1 984 MAP Kinase Kinase Kinase AT1G73660 62.880 0.0 1149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pral1576g00051 PK_Tyr_Ser-Thr 2.9e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1576g00051 - - qsa:O6P43_005170 1397.1