Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1576g00050 ATGAAGAACATTCTTAAGAAGCTTCATATCATGCCTAATCGATCAGAAGATGCAGCAGGATCTAATTCATCAAAAGGCCACAACTCCAATGATGGTTCATTCCCTAAGAAGCCATCAAACTCTCGCTCCCCTCAAAGCTCTGAGCATAAACCCTTTCCGGGGATTTCGAGCTGGTTGCACTTGGTTACTAACAGGCAGGGTCCCAGTCCTCCATCTTCGAATCTGAAGAGAGGAGAAAGAGTGGAAACATCTGATTTACTTAGCAGTGGCGGTTTGGATACTGTTTCTGATTCAGCGATGCGTGATTCTGGGTCTAGCAGTTCGAGGGATCCTGAAGTAGAGGAAGAGTATCAGATACAATTGGCTTTAGAGATGAGTGCAAAGGAGGATCCCGAGGCAGTGCAGATTGAGGCTGTTAAGCAGATCAGCTTGGGTTCTTGTGGCCCTGATAATACACCAGCTGAAGTTGTGGCATACAGATATTGGAATTACAATGCTCTTGGTTTTGATGACAAGATCTTGGATGGTTTCTATGATCTTTATGGGATCTTAAATGAGTCTCAGTCAACCACTGCAAGAATGCCTTCCCTGGTAGATCTGCAAGGGACACCAACCTCAGATATTGTCACTTGGGAAGCAGTCCTGGTCAATAGGGCTGCTGATTCAAATTTGTTGAAACTTGAGCAGAAAGCCCTGGAGTTGGTTGTCAAGTCAAGACCAGATTCTGAAGGAGTTATAAATAGCAATTTGGTGCAGAGGCTTGCCATATTAGTGGCTGACTACATGGGTGGACCGGTTACACATCCTGAAAGCATGACAAGAGCATGGAGGAGTCTTAGTTACAGTCTCAAAGCAACTCTTGGTAGCATGGTTTTGCCACTTGGCTCCTTGACCATTGGATTGGCTCGGCATCGTGCGTTGTTATTTAAGGTTTTATCTGATAGTGTGGGCATCCCATGCTGTTTGGTCAAAGGACTACATTACACAGGTTCTGATGATGTGGCCATGAACTTTGTCAAGGTTGACGGTGGAAGGGAATACATTGTTGACCTGATGGCAGATCCTGGAACACTTATTCCATCTGATGCACCTGGATCGCATAACGAGTATGATGAATCCTTTTTTGTGGGCAGTCCTTTGTCAAGGGACCTTGATTCCTCTCGGGTAGCGTCATCAAGCAGTGGGATTGGAAGTTCATCTGAAGAAGCTTCAGACTTTGGTACATTTGATAAAAGAAACATATCAAAACAGATTGCCTATTTGGGCAAAGAATCTTATGTAAGCAATCCCATTTTAGGTGAAGACGAATCAAAGAGCCCATTGAATGATGATTTCAGATGTCCCCCTAATGTGGAAAAGTTCACAATGCAGGGAGCTCCGAGTAGACTAAATCATCCCTACGCTCATGCAAGATCTCCTTCTTGGACTGAAGGGATCAGTTCCCCTGCAGTACGTAGGATGAAAGTGAAAGATGTTTCACAATATATGATAGATGCTGCAAAGGGGAATCCTCAGTTAGCTCAAAAACTTCACGATGTTTTACTTGAAAGTGGTGTTGTTGCTCCTCCAAACTTGTTTTCTGAAACTTATCATGAGCAGTTAGGTGCCCCAATTGTTGAGACTAACTCCAACACTGAGGAAAACGAATATGAACGGGAGTGTGGGAACCTGGAAGCTCAGGCTGCTTCCCACCGAAGTCTTGCTCAATTCTTGCCTCCTTTGCCTCCCTACAGAGCTCATCTTAAAGCAACTCCTAGCAGTCAGCTGGAGCATTCTAAGCCTGTAGAAGGTTTAGGGATCAACCTTCCTTTTGATCCTAAGGAAGCAGCTGGACAGCGCCTACAATCACATGCAGAAGCAACTCCTATAAGATATGGGAAAAATGTACCAGTTGCTGCAGCTGCAGCAGCAGCTGCAGCTGTTGTTGCTTCATCAATGGTAGTTGCCGTGGCAAGGTCAAGTACTGACTCAACTATTGAGCTTCCTGTGGCAGCAGCTGCTACTGCTACTGCTGCAGCTGTAGTAGCAACCACTGCGGCTGTTGGTAAGGGAAGTCGGAGTGATGGAGATTCAGATGGTGCTTTTTATGAACAGAAGGGTAGTGATCATGGAGAACATAGTGGTTTAGGAGCAAACTCAGAAGGTGAGAGAATATCTGACAGATCAATAAGTAATGATAGTACAAAATCTGATTCCGCACTAGATGATGTTGCTGAGTATGAAATTCCATGGGAGGATATCACACTGGGATCATATGGGGAGGTGTACCGGGGTGAATGGCATGGAACTGAAGTCGCTGTAAAGAGATTTTTGGATCAAGACATCTATGGTGAATCTCTTGAGGAATTCATAAGTGAGGTCCGAATAATGAAAAGGCTCAGGCATCCAAATGTTGTCCTCTTCATGGGAGCTATAACTAAACCTCCAAATCTTTCCATTGTCACAGAATTTCTTCCCAGAGGAAGTTTGTATAGATTAATCCACCGGCCTAACAATCAATTAGACGAGCGAAGACGACTGAGGATGGCCCTAGATGCTGCACGAGGAATGAACTATTTGCATAACTGCTCTCCAGTGATAGTCCATCGTGATTTGAAGTCTCCAAATCTTCTTGTTGACAAAAACTGGGTTGTGAAGGTATGCGACTTTGGTTTATCACGAGTGAAGCACAGTACATTCCTTTCCTCAAGATCAACTGCAGGAACAGCAGAGTGGATGGCTCCAGAAATGTTGAGAAATGAGCCTTCAAACGAAAAGTGCGATGTTTTCAGTTTTGGGGTCATATTATGGGAGCTCTCTACGATGCGGCAACCCTGGGGAGGAATGAATCCAATGCAAGTTGTTGGTGCTGTGGGTTTCCAACATCGCCGACTTGAAATCCCAGATGATATGGACCCTGCCATTGCGGACATTATCAGAAAATGCTGGCAGACAGATCCAAAGTTGAGACCGAGCTTTGCTGAAATAATGGCAGCTCTGAAGCCATTGCAGAAGCCAATAATTAGTTCGCAAGTGCAAAGAACGATCGGAGGACATGAAAAGGCTCAGTCATCAGGAGCTGCACAAGAGCCAACTGGATAG 3081 0.4492 MKNILKKLHIMPNRSEDAAGSNSSKGHNSNDGSFPKKPSNSRSPQSSEHKPFPGISSWLHLVTNRQGPSPPSSNLKRGERVETSDLLSSGGLDTVSDSAMRDSGSSSSRDPEVEEEYQIQLALEMSAKEDPEAVQIEAVKQISLGSCGPDNTPAEVVAYRYWNYNALGFDDKILDGFYDLYGILNESQSTTARMPSLVDLQGTPTSDIVTWEAVLVNRAADSNLLKLEQKALELVVKSRPDSEGVINSNLVQRLAILVADYMGGPVTHPESMTRAWRSLSYSLKATLGSMVLPLGSLTIGLARHRALLFKVLSDSVGIPCCLVKGLHYTGSDDVAMNFVKVDGGREYIVDLMADPGTLIPSDAPGSHNEYDESFFVGSPLSRDLDSSRVASSSSGIGSSSEEASDFGTFDKRNISKQIAYLGKESYVSNPILGEDESKSPLNDDFRCPPNVEKFTMQGAPSRLNHPYAHARSPSWTEGISSPAVRRMKVKDVSQYMIDAAKGNPQLAQKLHDVLLESGVVAPPNLFSETYHEQLGAPIVETNSNTEENEYERECGNLEAQAASHRSLAQFLPPLPPYRAHLKATPSSQLEHSKPVEGLGINLPFDPKEAAGQRLQSHAEATPIRYGKNVPVAAAAAAAAAVVASSMVVAVARSSTDSTIELPVAAAATATAAAVVATTAAVGKGSRSDGDSDGAFYEQKGSDHGEHSGLGANSEGERISDRSISNDSTKSDSALDDVAEYEIPWEDITLGSYGEVYRGEWHGTEVAVKRFLDQDIYGESLEEFISEVRIMKRLRHPNVVLFMGAITKPPNLSIVTEFLPRGSLYRLIHRPNNQLDERRRLRMALDAARGMNYLHNCSPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRVKHSTFLSSRSTAGTAEWMAPEMLRNEPSNEKCDVFSFGVILWELSTMRQPWGGMNPMQVVGAVGFQHRRLEIPDDMDPAIADIIRKCWQTDPKLRPSFAEIMAALKPLQKPIISSQVQRTIGGHEKAQSSGAAQEPTG 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1576g00050 1026 SMART serkin_6 744 1001 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1576g00050 1026 MobiDBLite consensus disorder prediction 681 732 - -
Pral1576g00050 1026 FunFam Serine/threonine-protein kinase CTR1 820 1003 - -
Pral1576g00050 1026 MobiDBLite consensus disorder prediction 690 704 - -
Pral1576g00050 1026 Pfam Protein tyrosine and serine/threonine kinase 746 993 IPR001245 GO:0004672|GO:0006468
Pral1576g00050 1026 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 413 1002 - -
Pral1576g00050 1026 Gene3D Transferase(Phosphotransferase) domain 1 820 1005 - -
Pral1576g00050 1026 SUPERFAMILY Protein kinase-like (PK-like) 744 992 IPR011009 -
Pral1576g00050 1026 Pfam Ethylene-responsive protein kinase Le-CTR1 154 359 - -
Pral1576g00050 1026 CDD STKc_MAP3K-like 750 993 - -
Pral1576g00050 1026 ProSiteProfiles Protein kinase domain profile. 741 1001 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1576g00050 1026 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 114 133 IPR003903 -
Pral1576g00050 1026 MobiDBLite consensus disorder prediction 16 52 - -
Pral1576g00050 1026 ProSitePatterns Serine/Threonine protein kinases active-site signature. 860 872 IPR008271 GO:0004672|GO:0006468
Pral1576g00050 1026 PRINTS Tyrosine kinase catalytic domain signature 815 828 IPR001245 GO:0004672|GO:0006468
Pral1576g00050 1026 PRINTS Tyrosine kinase catalytic domain signature 854 872 IPR001245 GO:0004672|GO:0006468
Pral1576g00050 1026 PRINTS Tyrosine kinase catalytic domain signature 964 986 IPR001245 GO:0004672|GO:0006468
Pral1576g00050 1026 PRINTS Tyrosine kinase catalytic domain signature 901 911 IPR001245 GO:0004672|GO:0006468
Pral1576g00050 1026 PRINTS Tyrosine kinase catalytic domain signature 920 942 IPR001245 GO:0004672|GO:0006468
Pral1576g00050 1026 MobiDBLite consensus disorder prediction 59 77 - -
Pral1576g00050 1026 Gene3D Phosphorylase Kinase; domain 1 739 818 - -
Pral1576g00050 1026 MobiDBLite consensus disorder prediction 1 115 - -
Pral1576g00050 1026 MobiDBLite consensus disorder prediction 87 106 - -
Pral1576g00050 1026 FunFam Serine/threonine-protein kinase isoform 1 737 819 - -
Pral1576g00050 1026 MobiDBLite consensus disorder prediction 1004 1026 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1576g00050 Pral-Chr1576 273662 282019 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1576g00050 1 1009 MAP Kinase Kinase Kinase AT1G73660 62.341 0.0 1140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pral1576g00050 PK_Tyr_Ser-Thr 2.5e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1576g00050 - - qsa:O6P43_005170 1412.9