Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1576g00049 ATGAAGAACATTCTTAAGAAGCTTCATATCATGCCTAATCGATCAGAAGATGCAGCAGGATCTAATTCATCAAAAGGCCACAACTCCAATGATGGTTCATTCCCTAAGAAGCCATCAAACTCTCGCTCCCCTCAAAGCTCTGAGCATAAACCCTTTCCGGGGATTTCGAGCTGGTTGCACTTGGTTACTAACAGGCAGGGTCCCAGTCCTCCATCTTCGAATCTGAAGAGAGGAGAAAGAGTGGAAACATCTGATTTACTTAGCAGTGGCGGTTTGGATACTGTTTCTGATTCAGCGATGCGTGATTCTGGGTCTAGCAGTTCGAGGGATCCTGAAGTAGAGGAAGAGTATCAGATACAATTGGCTTTAGAGATGAGTGCAAAGGAGGATCCCGAGGCAGTGCAGATTGAGGCTGTTAAGCAGATCAGCTTGGGTTCTTGTGGCCCTGATAATACACCAGCTGAAGTTGTGGCATACAGATATTGGAATTACAATGCTCTTGGTTTTGATGACAAGATCTTGGATGGTTTCTATGATCTTTATGGGATCTTAAATGAGTCTCAGTCAACCACTGCAAGAATGCCTTCCCTGGTAGATCTGCAAGGGACACCAACCTCAGATATTGTCACTTGGGAAGCAGTCCTGGTCAATAGGGCTGCTGATTCAAATTTGTTGAAACTTGAGCAGAAAGCCCTGGAGTTGGTTGTCAAGTCAAGACCAGATTCTGAAGGAGTTATAAATAGCAATTTGGTGCAGAGGCTTGCCATATTAGTGGCTGACTACATGGGTGGACCGGTTACACATCCTGAAAGCATGACAAGAGCATGGAGGAGTCTTAGTTACAGTCTCAAAGCAACTCTTGGTAGCATGGTTTTGCCACTTGGCTCCTTGACCATTGGATTGGCTCGGCATCGTGCGTTGTTATTTAAGGTTTTATCTGATAGTGTGGGCATCCCATGCTGTTTGGTCAAAGGACTACATTACACAGGTTCTGATGATGTGGCCATGAACTTTGTCAAGGTTGACGGTGGAAGGGAATACATTGTTGACCTGATGGCAGATCCTGGAACACTTATTCCATCTGATGCACCTGGATCGCATAACGAGTATGATGAATCCTTTTTTGTGGGCAGTCCTTTGTCAAGGGACCTTGATTCCTCTCGGGTAGCGTCATCAAGCAGTGGGATTGGAAGTTCATCTGAAGAAGCTTCAGACTTTGGTACATTTGATAAAAGAAACATATCAAAACAGATTGCCTATTTGGGCAAAGAATCTTATGTAAGCAATCCCATTTTAGGTGAAGACGAATCAAAGAGCCCATTGAATGATGATTTCAGATGTCCCCCTAATGTGGAAAAGTTCACAATGCAGGGAGCTCCGAGTAGACTAAATCATCCCTACGCTCATGCAAGATCTCCTTCTTGGACTGAAGGGATCAGTTCCCCTGCAGTACGTAGGATGAAAGTGAAAGATGTTTCACAATATATGATAGATGCTGCAAAGGGGAATCCTCAGTTAGCTCAAAAACTTCACGATGTTTTACTTGAAAGTGGTGTTGTTGCTCCTCCAAACTTGTTTTCTGAAACTTATCATGAGCAGTTAGGTGCCCCAATTGTTGAGACTAACTCCAACACTGAGGAAAACGAATATGAACGGGAGTGTGGGAACCTGGAAGCTCAGGCTGCTTCCCACCGAAGTCTTGCTCAATTCTTGCCTCCTTTGCCTCCCTACAGAGCTCATCTTAAAGCAACTCCTAGCAGTCAGCTGGAGCATTCTAAGCCTGTAGAAGGTTTAGGGATCAACCTTCCTTTTGATCCTAAGGAAGCAGCTGGACAGCGCCTACAATCACATGCAGAAGCAACTCCTATAAGATATGGGAAAAATGTACCAGTTGCTGCAGCTGCAGCAGCAGCTGCAGCTGTTGTTGCTTCATCAATGGTAGTTGCCGTGGCAAGGTCAAGTACTGACTCAACTATTGAGCTTCCTGTGGCAGCAGCTGCTACTGCTACTGCTGCAGCTGTAGTAGCAACCACTGCGGCTGTTGGTAAGGGAAGTCGGAGTGATGGAGATTCAGATGGTGCTTTTTATGAACAGAAGGGTAGTGATCATGGAGAACATAGTGGTTTAGGAGCAAACTCAGAAGGTGAGAGAATATCTGACAGATCAATAAGTAATGATAGTACAAAATCTGATTCCGCACTAGATGATGTTGCTGAGTATGAAATTCCATGGGAGGATATCACACTGGGTGAGCGTATTGGGCTTGGATCATATGGGGAGGTGTACCGGGGTGAATGGCATGGAACTGAAGTCGCTGTAAAGAGATTTTTGGATCAAGACATCTATGGTGAATCTCTTGAGGAATTCATAAGTGAGGTCCGAATAATGAAAAGGCTCAGGCATCCAAATGTTGTCCTCTTCATGGGAGCTATAACTAAACCTCCAAATCTTTCCATTGTCACAGAATTTCTTCCCAGAGGAAGTTTGTATAGATTAATCCACCGGCCTAACAATCAATTAGACGAGCGAAGACGACTGAGGATGGCCCTAGATGCTGCACGAGGAATGAACTATTTGCATAACTGCTCTCCAGTGATAGTCCATCGTGATTTGAAGTCTCCAAATCTTCTTGTTGACAAAAACTGGGTTGTGAAGGTATGCGACTTTGGTTTATCACGAGTGAAGCACAGTACATTCCTTTCCTCAAGATCAACTGCAGGAACAGCAGAGTGGATGGCTCCAGAAATGTTGAGAAATGAGCCTTCAAACGAAAAGTGCGATGTTTTCAGTTTTGGGGTCATATTATGGGAGCTCTCTACGATGCGGCAACCCTGGGGAGGAATGAATCCAATGCAAGTTGTTGGTGCTGTGGGTTTCCAACATCGCCGACTTGAAATCCCAGATGATATGGACCCTGCCATTGCGGACATTATCAGAAAATGCTGGCAGACAGATCCAAAGTTGAGACCGAGCTTTGCTGAAATAATGGCAGCTCTGAAGCCATTGCAGAAGCCAATAATTAGTTCGCAAGTGCAAAGAACGATCGGAGGACATGAAAAGGCTCAGTCATCAGGAGCTGCACAAGAGCCAACTGGATAG 3099 0.4498 MKNILKKLHIMPNRSEDAAGSNSSKGHNSNDGSFPKKPSNSRSPQSSEHKPFPGISSWLHLVTNRQGPSPPSSNLKRGERVETSDLLSSGGLDTVSDSAMRDSGSSSSRDPEVEEEYQIQLALEMSAKEDPEAVQIEAVKQISLGSCGPDNTPAEVVAYRYWNYNALGFDDKILDGFYDLYGILNESQSTTARMPSLVDLQGTPTSDIVTWEAVLVNRAADSNLLKLEQKALELVVKSRPDSEGVINSNLVQRLAILVADYMGGPVTHPESMTRAWRSLSYSLKATLGSMVLPLGSLTIGLARHRALLFKVLSDSVGIPCCLVKGLHYTGSDDVAMNFVKVDGGREYIVDLMADPGTLIPSDAPGSHNEYDESFFVGSPLSRDLDSSRVASSSSGIGSSSEEASDFGTFDKRNISKQIAYLGKESYVSNPILGEDESKSPLNDDFRCPPNVEKFTMQGAPSRLNHPYAHARSPSWTEGISSPAVRRMKVKDVSQYMIDAAKGNPQLAQKLHDVLLESGVVAPPNLFSETYHEQLGAPIVETNSNTEENEYERECGNLEAQAASHRSLAQFLPPLPPYRAHLKATPSSQLEHSKPVEGLGINLPFDPKEAAGQRLQSHAEATPIRYGKNVPVAAAAAAAAAVVASSMVVAVARSSTDSTIELPVAAAATATAAAVVATTAAVGKGSRSDGDSDGAFYEQKGSDHGEHSGLGANSEGERISDRSISNDSTKSDSALDDVAEYEIPWEDITLGERIGLGSYGEVYRGEWHGTEVAVKRFLDQDIYGESLEEFISEVRIMKRLRHPNVVLFMGAITKPPNLSIVTEFLPRGSLYRLIHRPNNQLDERRRLRMALDAARGMNYLHNCSPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRVKHSTFLSSRSTAGTAEWMAPEMLRNEPSNEKCDVFSFGVILWELSTMRQPWGGMNPMQVVGAVGFQHRRLEIPDDMDPAIADIIRKCWQTDPKLRPSFAEIMAALKPLQKPIISSQVQRTIGGHEKAQSSGAAQEPTG 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1576g00049 1032 MobiDBLite consensus disorder prediction 681 732 - -
Pral1576g00049 1032 FunFam Serine/threonine-protein kinase CTR1 826 1009 - -
Pral1576g00049 1032 MobiDBLite consensus disorder prediction 690 704 - -
Pral1576g00049 1032 Pfam Ethylene-responsive protein kinase Le-CTR1 154 359 - -
Pral1576g00049 1032 FunFam Serine/threonine-protein kinase isoform 1 738 825 - -
Pral1576g00049 1032 Gene3D Transferase(Phosphotransferase) domain 1 826 1011 - -
Pral1576g00049 1032 ProSitePatterns Protein kinases ATP-binding region signature. 753 774 IPR017441 GO:0005524
Pral1576g00049 1032 Gene3D Phosphorylase Kinase; domain 1 740 824 - -
Pral1576g00049 1032 SMART serkin_6 747 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1576g00049 1032 CDD STKc_MAP3K-like 753 999 - -
Pral1576g00049 1032 ProSiteProfiles Protein kinase domain profile. 747 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1576g00049 1032 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 114 133 IPR003903 -
Pral1576g00049 1032 MobiDBLite consensus disorder prediction 16 52 - -
Pral1576g00049 1032 SUPERFAMILY Protein kinase-like (PK-like) 730 998 IPR011009 -
Pral1576g00049 1032 ProSitePatterns Serine/Threonine protein kinases active-site signature. 866 878 IPR008271 GO:0004672|GO:0006468
Pral1576g00049 1032 MobiDBLite consensus disorder prediction 59 77 - -
Pral1576g00049 1032 PRINTS Tyrosine kinase catalytic domain signature 860 878 IPR001245 GO:0004672|GO:0006468
Pral1576g00049 1032 PRINTS Tyrosine kinase catalytic domain signature 821 834 IPR001245 GO:0004672|GO:0006468
Pral1576g00049 1032 PRINTS Tyrosine kinase catalytic domain signature 907 917 IPR001245 GO:0004672|GO:0006468
Pral1576g00049 1032 PRINTS Tyrosine kinase catalytic domain signature 926 948 IPR001245 GO:0004672|GO:0006468
Pral1576g00049 1032 PRINTS Tyrosine kinase catalytic domain signature 970 992 IPR001245 GO:0004672|GO:0006468
Pral1576g00049 1032 MobiDBLite consensus disorder prediction 1010 1032 - -
Pral1576g00049 1032 MobiDBLite consensus disorder prediction 1 115 - -
Pral1576g00049 1032 MobiDBLite consensus disorder prediction 87 106 - -
Pral1576g00049 1032 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 412 1008 - -
Pral1576g00049 1032 Pfam Protein tyrosine and serine/threonine kinase 747 999 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1576g00049 Pral-Chr1576 273662 282207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1576g00049 1 1015 MAP Kinase Kinase Kinase AT1G73660 62.829 0.0 1158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pral1576g00049 PK_Tyr_Ser-Thr 3.1e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1576g00049 - - qsa:O6P43_005170 1431