Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1576g00045 ATGTGGATGGTGGGACATAACGATGGTGGTGAGGCTAGCATGGTTGATCACTCATTCAATGGAAGAAAGCTCAGGCCTCTCATTCCAAGGCCAGTGACTTCTTCCAATAATACTTGTGCTACGACTCCTCCTTGCCTAAGAAGTATTCACGGCTCCGATTTGTTCACACAATATCACGATCTGACATCAACGACGGATCAGAGTAAGAAAGAGTTCAATACTCCACCAGTTGTGGTGAGCTCAAGGTGGAATCCTACTCCAGAGCAGCTAAGAGCCCTTGAAGAGTTGTATCGTCGAGGAACAAGAACGCCATCTGCTGAGGAAATTCAACATATCACTGCACAGCTGCGGAGATTTGGTAAAATTGAAGGGAAGAATGTTTTCTACTGGTTTCAGAATCACAAAGCCAGAGAAAGGCAGAAACGGCGCCGTCAGATGGAATCAGCTCCCCATGATTTTGATTGTCTAGAGAAGGAAGACTTAGGCGTTAGTAAGACACTGTTTGAAGTTGAACAGACCAAGAACTGGGCACCCTCTACAAACTGCAGTGCACTTGCAGAGGAATCTGTCTCGATACCAAGAGCAACAAAAGCAGTGGTGGCAGAACGAAGAGCGGATGGATGGATCCAATTCGATGAAGGGGAATTACAGCAAAGAAGAAACTTGATGGAAAGGGATGCCACGTGGCGGATGATGCAGCTATCATGTCCTCTTCCCCATCCTGCAGCCTCCACCCACCTCATCAGCACCTCTACAGCCAGCTTAATTGCTTCCACGAGCACAGTAACAGCAGGAGCAATTGACCCAAAGCTCATTAAGGCACATGATCTCAGCTTTATATCGCCTCACAGTGAAAGCACGGTCATCCACTTGGACGGTAGTATCAGCAGCGACCAAGTTGATCACTGTGGGGAACCTCAAACCCTTGAACTTTTCCCCCTAAGGAGTGGGGATGGCAGTGATAACGTCAACCATAAAGAGAGTGAGTTTTCAGTTTCTGCAATGAATGCCAACTTGACCCCAAGCCAGTTCTTTGAGTTCCTTCCCTTGAAGAACTAA 1059 0.4731 MWMVGHNDGGEASMVDHSFNGRKLRPLIPRPVTSSNNTCATTPPCLRSIHGSDLFTQYHDLTSTTDQSKKEFNTPPVVVSSRWNPTPEQLRALEELYRRGTRTPSAEEIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQMESAPHDFDCLEKEDLGVSKTLFEVEQTKNWAPSTNCSALAEESVSIPRATKAVVAERRADGWIQFDEGELQQRRNLMERDATWRMMQLSCPLPHPAASTHLISTSTASLIASTSTVTAGAIDPKLIKAHDLSFISPHSESTVIHLDGSISSDQVDHCGEPQTLELFPLRSGDGSDNVNHKESEFSVSAMNANLTPSQFFEFLPLKN 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1576g00045 352 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 66 347 IPR044555 GO:0003700|GO:0099402
Pral1576g00045 352 SUPERFAMILY Homeodomain-like 81 149 IPR009057 -
Pral1576g00045 352 ProSiteProfiles 'Homeobox' domain profile. 86 141 IPR001356 GO:0003677
Pral1576g00045 352 SMART HOX_1 78 145 IPR001356 GO:0003677
Pral1576g00045 352 FunFam WUSCHEL-related homeobox 4 80 147 - -
Pral1576g00045 352 Pfam Homeodomain 81 140 IPR001356 GO:0003677
Pral1576g00045 352 CDD homeodomain 82 142 IPR001356 GO:0003677
Pral1576g00045 352 Gene3D - 80 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1576g00045 Pral-Chr1576 252205 254177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1576g00045 1 352 Wox Gene Family AT3G18010 40.260 3.19e-65 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pral1576g00045 Homeodomain 1.1e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1576g00045 - - gmx:100777274 481.87