Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1576g00041 ATGGAAAACCTGATCGGCCTTCTGAGGATTCGGGTGAAGCGTGGGGTGAACCTCGCCGTTCGTGATGTTCGTAGCAGCGATCCTTACGTCGTCGTAAGGATGGGCAGACAGAGACTCAAGACTCGTGTGATAAAGAAGGATGTAAATCCTGAGTGGAATGAAGACCTGACCCTTTCAGTTACAGACCCGAGTCGTCCGATAACAATAACGGTGTATGACCATGACACGTTCAGCAAAGATGACAAAATGGGGGAAGCAGAGTTTGAGATAAGACCGTTTATAGAAGCGGTGAACATGAGGCTGGATGGGCTGCCGAGCGGGACGGTGGTGAGAAGATTGTATCCAGGCAGGCAAAATTGTTTGGCGGATGAGAGCTGCATTACGTACAGCGAAGGCAAGGTTGTGCAAGATTTGGTGCTCAGATTACGCAATGTTGAATGTGGTGAAGTTGAAATCCAATTGGAATGGATCCGCGTTCCTTCTACTTCCCGTTCCATTTAG 501 0.489 MENLIGLLRIRVKRGVNLAVRDVRSSDPYVVVRMGRQRLKTRVIKKDVNPEWNEDLTLSVTDPSRPITITVYDHDTFSKDDKMGEAEFEIRPFIEAVNMRLDGLPSGTVVRRLYPGRQNCLADESCITYSEGKVVQDLVLRLRNVECGEVEIQLEWIRVPSTSRSI 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1576g00041 166 Gene3D C2 domain 2 165 IPR035892 -
Pral1576g00041 166 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 100 IPR035892 -
Pral1576g00041 166 Pfam C2 domain 6 92 IPR000008 -
Pral1576g00041 166 CDD C2_ArfGAP 5 148 - -
Pral1576g00041 166 SMART C2_3c 7 102 IPR000008 -
Pral1576g00041 166 ProSiteProfiles C2 domain profile. 1 106 IPR000008 -
Pral1576g00041 166 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 3 161 IPR044562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1576g00041 Pral-Chr1576 208571 210302 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1576g00041 38 161 C2H2 Transcription Factor Family AT1G70790 57.937 1.18e-50 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1576g00041 - - rcu:8283127 272.707