Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1576g00019 ATGCGCATGGACCCGCAATACCCTAAACCTCGATCCTATGCACCACAGATGGAGATGACGATTCCCCCCTCCCAGCTTTCCGACAATGATCGGAGCAGCTCCGAATTGCGAGCTCTCGATTGTAACCTCACTTCGCTTTGCGAGCACATCCAGATGGAAGGCTTCAATTCCGGCTCATTCTCCGACATTGTGCTCCATGCAATGGGTTCCACTTATCACCTCCATCGCCTTATCCTTTCTCGGAGTTCTTACTTCAGGAATATGCTTCATGGTCCCTGGAAAGAAGCCAGTGCTCCTATTGTGACCCTGCATGTTGATGATAAGAATGTTAATGATGAGGCAATCACAATGGCCTTGGCATATCTCTATGGGCACCACCCTAAGCTTAGTGATAGCAATGCATTTCGGGTTCTTGCTGCCGCATCCTTTCTTGACCTCCAGGACTTATGTGCTATATGTACAGACTTCATTATATCTGAGCTGTGGACTTCAAATTTCTTGGCTTATCAGGTATTTGCAGAAAACCAAGACTATGGCATTCACGGGGAGCGTGTTAGAAATGCTTGTTGGGGCTACCTCTGTCAAAGCGGTGGCATGGAGTTGAAAGAGGTGCTTCCGAAACTTTCTTCTCAAACGGTACATGCACTACTGACCTCTGATGAACTGTGGATACCAAGTGAAGAGAAACGGTTTGGATTGGCATTAGACACATTCCTGGCAAAAAATGCTCACTGGAAAGCTGAGCATCCTGAGCAAGGAAGTTCTGGTTCTGAGTCTGCAACTAATAGTCATTCTGATTCTGATAATATCAAGGGAAAAAGTGGACCTGATAGCAGCACAAGTGATAGGTTGGGAAATGATCTAGGGCGTCTGAATATTAAAAGTGATGTAAAGGACACCATTGATCATAATCAGCAAGTCGAGCCTGCAGACAGTGTGACACGCTTCAACAAGGAGGATTCTGATTCTAATGAACTGGCACAAACAACATCATTTTCTGGTTCATCAAATTTGGAACCTAGATATGCTTGCAACATGGAAGGGCCTTCGTCAATCAGTAATTTGTTGTCGGAAAAAGATGGGATCAGAACATCATGTTCTTATGTTGAGATGCCTGTCAATGTTGGAGCGACTGGAGTATCTATTGAAGGGCCATCTGAGGAAGGTTCAAATTCTTCCTGCAATGGCCTCACATCCGGTGAATGGGGAAGATACAGCATGCCTCTTTTTCCATGGGGTGGCCGGGTAGTTGGTGGAAGACGACTTAAAGCTCACTCCAAAGGAAAGTATGGAATTCATGGGGATGAACATGAAGCTTTTGTAAATATCTTTGAAGGAGGTTCTCTTTTATACTGTAATATGTCTTTTGAGGCACTTCTGAGTGTCAGAAAGCAACTTGAAGAATTAGGCTTCCCTTGCAAAGCTGTAAATGACGGCCTTTGGCTGCAGATGCTTCTTAGTCAGAGGGTGCAAGAAATTGCTGCTGATACATGCAAAGCTTGTTCTCTCGTGAGTGCAGCATGCACCTGCCGGCAGCCATTTGCATTTTCTCAGGGAGTTACCACTCCTAGTTACTACATGCAAGAACACAACCAGAATAATAATTCTGGGAACATGGGAAACATATATGTTGCTGAGTCTACTCAAAGTGAAGGAACTGGCATATTTAGACCTGTACGAGTACATGTTAGAGGTGCTATTGATGGGCTTGCAGGTATTGGCCGAGGAACTACCTTTGTGCCAACATCTGCTTCACCTCCTACACGTTTTGTCTTCTCTCGCGTGCCATTTGGTGTTGGCAACAGAAACTACCCGCAATCTGCGGCTAATGATGATTCAGAGACACAAGCTGACCACAATGGAGACATGTCTGGAGATGGGTTGACAGCTTTGGTTGGGCTAAGTCAGGGAGGGAGTAGTGGAACCAATGCACATGGAGAGATGTCACAAAAGGGATGTGAGACTGGCATGCGAAGCAGAATCTCTGGAACTGCTGCTGGAGGCCCGAGCACTGGTGGCATTCCCATGCAAATGTTAGAGGCACCAGAACATGCCATAGGAATAGAATGGGAGAATACTAGCAGTTCTTCTATATCATTGGATTTGAAGACACCTTTAAGTCATTTTCCTCCATTTCGTTTTGGGGTGCAATTTGAGGATGTGCACAGGCTTGGTGATGGTCAGGTGAAGCATTCTCCAGAAGTGTTCTATGCTGGTTCTCTATGGAAGGTCAGTGTACAGGCTTTTAATGATGAAGACCCCCAGGGACGGAGAACTCTTGGATTGTTTCTTCACCGTCGGAAAGCAGAAATTGCTGATTTACATAGAAAGGTGCACATGTATGTGGATTCCCGTGAAAAGGTGACTGCTCGCTATCAGTTGATTTGCCCATCAAAAAGGGAAGTGATGGTGTTCGGAAGCTTTAAACAAACGGGCACTCTTCTACCTAAAGCTCCCAAGGGATGGGGTTGGCGAACTGCTCTGCTATTCGATGAGCTTGCTGATCTTCTGCAGAACGGGGCCCTTCGAATAATTGCTGTAGTGCAGCTCGTTTAA 2556 0.4581 MRMDPQYPKPRSYAPQMEMTIPPSQLSDNDRSSSELRALDCNLTSLCEHIQMEGFNSGSFSDIVLHAMGSTYHLHRLILSRSSYFRNMLHGPWKEASAPIVTLHVDDKNVNDEAITMALAYLYGHHPKLSDSNAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQVFAENQDYGIHGERVRNACWGYLCQSGGMELKEVLPKLSSQTVHALLTSDELWIPSEEKRFGLALDTFLAKNAHWKAEHPEQGSSGSESATNSHSDSDNIKGKSGPDSSTSDRLGNDLGRLNIKSDVKDTIDHNQQVEPADSVTRFNKEDSDSNELAQTTSFSGSSNLEPRYACNMEGPSSISNLLSEKDGIRTSCSYVEMPVNVGATGVSIEGPSEEGSNSSCNGLTSGEWGRYSMPLFPWGGRVVGGRRLKAHSKGKYGIHGDEHEAFVNIFEGGSLLYCNMSFEALLSVRKQLEELGFPCKAVNDGLWLQMLLSQRVQEIAADTCKACSLVSAACTCRQPFAFSQGVTTPSYYMQEHNQNNNSGNMGNIYVAESTQSEGTGIFRPVRVHVRGAIDGLAGIGRGTTFVPTSASPPTRFVFSRVPFGVGNRNYPQSAANDDSETQADHNGDMSGDGLTALVGLSQGGSSGTNAHGEMSQKGCETGMRSRISGTAAGGPSTGGIPMQMLEAPEHAIGIEWENTSSSSISLDLKTPLSHFPPFRFGVQFEDVHRLGDGQVKHSPEVFYAGSLWKVSVQAFNDEDPQGRRTLGLFLHRRKAEIADLHRKVHMYVDSREKVTARYQLICPSKREVMVFGSFKQTGTLLPKAPKGWGWRTALLFDELADLLQNGALRIIAVVQLV 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1576g00019 851 ProSiteProfiles BTB domain profile. 61 131 IPR000210 GO:0005515
Pral1576g00019 851 MobiDBLite consensus disorder prediction 323 337 - -
Pral1576g00019 851 SMART BTB_4 61 161 IPR000210 GO:0005515
Pral1576g00019 851 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 15 851 - -
Pral1576g00019 851 MobiDBLite consensus disorder prediction 1 33 - -
Pral1576g00019 851 SUPERFAMILY POZ domain 55 159 IPR011333 -
Pral1576g00019 851 MobiDBLite consensus disorder prediction 252 286 - -
Pral1576g00019 851 Gene3D Potassium Channel Kv1.1; Chain A 27 194 IPR011333 -
Pral1576g00019 851 MobiDBLite consensus disorder prediction 246 337 - -
Pral1576g00019 851 MobiDBLite consensus disorder prediction 603 622 - -
Pral1576g00019 851 Pfam BTB/POZ domain 55 159 IPR000210 GO:0005515
Pral1576g00019 851 MobiDBLite consensus disorder prediction 18 33 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pral1576g00019 BTB 1.4e-14 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1576g00019 - - qsa:O6P43_003564 1338.17