Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1575g00007 ATGATGATTTCTTGTGTTGTGTTGCTAATAGCTCCGACTGGTGCTGGAGATGATGATGGAGGGAAGAAGTTGATAATTGGACTTCCTTATTATAAATCAGGTTTCGCCCAGTTTGTGGATGTACAAATCGATCCTACTAATAACAATAATCAGGTCGTCCAGGCTAGCGGCTATTCTATTGCCGTCTTCAATGCTACAATAGCCTACCTTACGCGTTTACATCACGGTATTTCTTTCGAGTTTAGAGCTTTCGTAAACAACAATGGAAGCAGTGCTGGGTATTATGACGCACTTGTCTCCCAAATTTCTGCAGAAAAGTATGACGCTGTGGTGGGAGACGTGACGATTTTGGAAAATCGGTTTAACCATGCAGATTTCACGTTGCCATATACACAATCTAATGTGAAGATGCTTGTGAAAATCCGGCATGATCCACGGTTGAACATGTGGATTTTTGTACGACCGTTTAATTGGAGTCTTTGGAAAAAATTCAGTGGGGTTTCTATCCTGTGGCTTCCTGTTGTGCAAGCAGTTTTTCCCGAAAGAGAATCACTGGCCAAAAATTGCTCTAGGTTTGTGCTGGTGATGTGGTTGATATTGGTATTTGTGCTCATGCAAAGCTACACAGCATGCTTATCATCTATCTTAACGGTACATCAATTACAACCTCGATACCTTAGTGAGAATGATGTTGCAGAAGATTCCAACATTAATGTTGGATACCACAGTGGCTCATTTGTGAGGGACTTATTGGTTGATAACTTGATGATCAATAGTTCAAGGTGA 786 0.4109 MMISCVVLLIAPTGAGDDDGGKKLIIGLPYYKSGFAQFVDVQIDPTNNNNQVVQASGYSIAVFNATIAYLTRLHHGISFEFRAFVNNNGSSAGYYDALVSQISAEKYDAVVGDVTILENRFNHADFTLPYTQSNVKMLVKIRHDPRLNMWIFVRPFNWSLWKKFSGVSILWLPVVQAVFPERESLAKNCSRFVLVMWLILVFVLMQSYTACLSSILTVHQLQPRYLSENDVAEDSNINVGYHSGSFVRDLLVDNLMINSSR 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1575g00007 261 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 20 260 IPR015683 -
Pral1575g00007 261 Gene3D - 166 252 - -
Pral1575g00007 261 Gene3D - 26 165 - -
Pral1575g00007 261 SUPERFAMILY Periplasmic binding protein-like II 8 254 - -
Pral1575g00007 261 Pfam Ligand-gated ion channel 160 233 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1575g00007 Pral-Chr1575 55972 57141 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1575g00007 12 251 Ion Channels AT2G29120 36.194 2.09e-42 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1575g00007 K05387 - pcin:129319703 362.844