Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1575g00003 ATGGCTAAGTCCTTGAAGTGCCTTCTCTTCTGGCTTCTTTTGCAGCTTCTTCTGCTACAAAACTCCCAGACTGTGAATGGGTCACCCAATTTGCTGAGAATAGGCGTACCAAAGAAAGATGGTTTCACCCAATTCGTGAAAGTACGATGGGAACCTCGTGAAAATAAGTACAAAGTCTCTGGAGGATATTGCATTGATGTCTTTAATGCCGTAATAAAGCACCTACCCTTTAAGGTTTCTCCTGAGTTTATTCCCTACGTCAATCAAACAGGACAAAGCGCCGGCACATACGATTCCCTCATCCAGCAAATTCCTGAAAAGTACGATGCTGTGGTGGGAGACGTGACGATCGTGGCCAACCGTTCGAGGTTTGTGGATTTTACGCTGCCATACACGGAGACAGGAGTATCGATGATAGTAACAGCCAAACATGGGAGGCACCGAACCATGTGGATTTTCGTGAAACCCTTCAGTTGGGGCCTGTGGCTTAGCATAGCCATCGCCTCTATCTCTATTGGTTTCGTCATATCAATCATGGAACGAAATGTGAACAATTTGCCTGAAAGAGGATCCCAAACTACTTCACCGAAACAGCTCAACGTAGTCACCATTCTATGGTTTCCATTATTACAGGCCGTGCTTCCTGATCGAGAGGTTGTAGTCAAGAGCTGTTCGAGATTTGTGTTGATGGTTTGGCTATTATTAGCCTTCGTGCTGATGCAGAGTTACACTGCGAGCTTGACAACGATACTAACGGTGGATCAGCTACAGCCTAGTTTTCTGAATGTGAATGATCTTAGAAAAGGGGGTTATTATGTTGGCTATCAAGCTAATTCTTTCGTAAGGGATCTTTTGGTGAACAGATTAAAGCTTGATCCCTCCAAGCTGAGGGCTTATGATAACCTTTCTGAATATCACCAAGCTTTATCAAAAGGAAGCCAGGGAGGTGGTGTCGCAGCTATATTTGACGAAATTCCTTTTCTTAAGCTTTACCTTAATAAATTTGGATCCAACTACGTGATGGCCGGACCAACCTATCGAGCAGATGGCTTTGGTTTTGCATTTCAGCTTGGCTCTAATCTAACCTCTCACTTTTCAAGAGCTATCTTGAATGTGACTGAGAGTGATATAATGGATCGTATTCAGAAGAAATATTTTGGGGATGATGACAATGGAAGAGTCCAAGATCAAACTGGGCAAGTGTCATCAACAACTACAACGAACCTTACTTTTCATAGCTTTCAAGGGCTTTTCTTGGTCACTGGAATCGCTACGGTTTTGGCACTGATAGTCTCAGAAAGTGTTATTTGGCAAAAACCCATTTCAATGGCTAGAGCTTACAGTGAGAAGTATTTGTTCGGTAGTACTCCTACACGTTCCAGAGATAACACTGTTCATCCAAGCTCTGATTCTCCAGCTGCGATAGATACTTCAGCTTCAGATTCACCAGATGGAAACAGATAA 1464 0.4331 MAKSLKCLLFWLLLQLLLLQNSQTVNGSPNLLRIGVPKKDGFTQFVKVRWEPRENKYKVSGGYCIDVFNAVIKHLPFKVSPEFIPYVNQTGQSAGTYDSLIQQIPEKYDAVVGDVTIVANRSRFVDFTLPYTETGVSMIVTAKHGRHRTMWIFVKPFSWGLWLSIAIASISIGFVISIMERNVNNLPERGSQTTSPKQLNVVTILWFPLLQAVLPDREVVVKSCSRFVLMVWLLLAFVLMQSYTASLTTILTVDQLQPSFLNVNDLRKGGYYVGYQANSFVRDLLVNRLKLDPSKLRAYDNLSEYHQALSKGSQGGGVAAIFDEIPFLKLYLNKFGSNYVMAGPTYRADGFGFAFQLGSNLTSHFSRAILNVTESDIMDRIQKKYFGDDDNGRVQDQTGQVSSTTTTNLTFHSFQGLFLVTGIATVLALIVSESVIWQKPISMARAYSEKYLFGSTPTRSRDNTVHPSSDSPAAIDTSASDSPDGNR 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1575g00003 487 Gene3D - 150 286 - -
Pral1575g00003 487 CDD GluR_Plant 32 386 - -
Pral1575g00003 487 Pfam Bacterial extracellular solute-binding proteins, family 3 61 387 IPR001638 -
Pral1575g00003 487 SUPERFAMILY Periplasmic binding protein-like II 8 389 - -
Pral1575g00003 487 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 30 439 IPR015683 -
Pral1575g00003 487 Gene3D - 28 149 - -
Pral1575g00003 487 SMART GluR_14 31 388 IPR001320 GO:0015276|GO:0016020
Pral1575g00003 487 FunFam Glutamate receptor 31 150 - -
Pral1575g00003 487 Gene3D - 337 393 - -
Pral1575g00003 487 MobiDBLite consensus disorder prediction 456 487 - -
Pral1575g00003 487 Pfam Ligand-gated ion channel 388 424 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1575g00003 Pral-Chr1575 34833 36587 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1575g00003 32 431 Ion Channels AT5G11210 38.653 1.59e-90 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1575g00003 K05387 - gmx:100807817 552.747