Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1575g00002 ATGGCCAGCCTAAATTTCTATTGCCATGCTTACCTTATAATGATTTCTTTTGCTGTCTTGTTAACAGCTGAGATTGGAGCAAGCGATGATGCAGGGTCACTCCTTGGAGGGAAGAAGTTGATAATTGGTGTCCCTAAGAAACCAAGCTTCATCCAGTTTGTGGATGCACAACTGAATCCTTTCAACAAGACTCAGCTCTTGAATGTTACTGGCTATTCAATTGACGTTTTCTTGGCTACAATAGCTTACCTTCGGCGTTCAAATTACAATATTTCCTACGAGTTTAGTGCTTTTGTCGACAAAAGTGGAAAAACTAGTGGGGGTTATGATGGACTCGTCTACGAGGTTCACCAAGGAAAGTACGATGCTGCAGTGGCGGATTTGACGATCGTGGCAAACAGGTCGAACTTCGTAGATTTTACGTTGCCATATGCACAGTCTGACCTCAGGATGCTTGTGAAAGGTCGACATGATCCACGCTTGAATATGTGGATTTTTGTACGACCATTTACCTGGGACATGTGGTTATGCATTGTCGTGGTTTGTATTTTCACGGGGGCTGTCATAATATTCATGGAATGCAATGTCCAGGAAGGTTCAACACGCCAAAATTCTTCAATCAAAAAGCAACTTAGTGGGGTTTCTATCTTGTGGCTTCCCGTAGTGCAAGCGGTTTTTCCTGAAAGAGAATCATTGGCCAAAAATTGTTCTAGGTTTGTGCTGGTGATGTGGCTGATTCTAGTATTTGTACTGATGCAAAGTTACACGGCATGCCTGTCATCAATCTTGACCGTACATCAGCTACAACCTCGTTTTTCTAGTGAGTATGAAATTAGAACAGATCCCAACATTTACGTTGGATGCCACTATGGCTCATTCATCCGCGGCTTACTGGTTGATAGCTTGAAGATTGATAGTTCAAGGGTGAAGGAATACGCTGGCATCGAAAGTTACAAGGAGGCCTTGGACAAAGGAAGCCGTAAAGGTGGCGTCGATGCAATTTTTGACGAAGTTCCCTACATGAAAGTCTTCCTTAAGAAATATGGTTCAAATTATGCCATGGTTGGGCCTAGGCACCGCACTGGTGGATTTGGCTTTGCATTTCGTAAGAATTCCACCTTAACCTCGTACTTCTCTCAAGCGATATTAAATGTAAGCGAGAGTAATGAAATGGACTGCATCGAGGATAACTATTTTAAAACTCATGACGCTAATGATGGCGTATCTACTTCATCGTTAGATGGTGATAGTGCCAGCCTCAGCGCATACAGCTTTGCAGGTTTGTTTGTGGTGTTTGGAATTCTTTCACTGCTAGCTTTGTTAGTCTCTGAACATCGTGTTTGGAGAAGACATGTTATGCTAATGAAAATGTATAGCAATGGATTGTTGGGTCGGAGTTGTACAAGAATTAATCCGTCAGAGGAAAGTTCTACAGCAAGAAGAAATGTTGAGGATGGAGAAGGTTCTATAAACAGAGAAAATATTGGATCAGAAGATGGATACTATAACCACGCAAAGATATTGGTGGCATCTCTTCCTTAA 1542 0.4215 MASLNFYCHAYLIMISFAVLLTAEIGASDDAGSLLGGKKLIIGVPKKPSFIQFVDAQLNPFNKTQLLNVTGYSIDVFLATIAYLRRSNYNISYEFSAFVDKSGKTSGGYDGLVYEVHQGKYDAAVADLTIVANRSNFVDFTLPYAQSDLRMLVKGRHDPRLNMWIFVRPFTWDMWLCIVVVCIFTGAVIIFMECNVQEGSTRQNSSIKKQLSGVSILWLPVVQAVFPERESLAKNCSRFVLVMWLILVFVLMQSYTACLSSILTVHQLQPRFSSEYEIRTDPNIYVGCHYGSFIRGLLVDSLKIDSSRVKEYAGIESYKEALDKGSRKGGVDAIFDEVPYMKVFLKKYGSNYAMVGPRHRTGGFGFAFRKNSTLTSYFSQAILNVSESNEMDCIEDNYFKTHDANDGVSTSSLDGDSASLSAYSFAGLFVVFGILSLLALLVSEHRVWRRHVMLMKMYSNGLLGRSCTRINPSEESSTARRNVEDGEGSINRENIGSEDGYYNHAKILVASLP 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1575g00002 513 Gene3D - 163 290 - -
Pral1575g00002 513 Gene3D - 33 162 - -
Pral1575g00002 513 SUPERFAMILY Periplasmic binding protein-like II 12 400 - -
Pral1575g00002 513 Pfam Bacterial extracellular solute-binding proteins, family 3 55 400 IPR001638 -
Pral1575g00002 513 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 37 466 IPR015683 -
Pral1575g00002 513 Pfam Ligand-gated ion channel 401 434 IPR001320 GO:0015276|GO:0016020
Pral1575g00002 513 CDD GluR_Plant 38 399 - -
Pral1575g00002 513 SMART GluR_14 39 401 IPR001320 GO:0015276|GO:0016020
Pral1575g00002 513 Gene3D - 291 404 - -
Pral1575g00002 513 MobiDBLite consensus disorder prediction 478 492 - -
Pral1575g00002 513 MobiDBLite consensus disorder prediction 473 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1575g00002 Pral-Chr1575 30791 33232 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1575g00002 37 442 Ion Channels AT2G29120 38.575 1.31e-71 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1575g00002 K05387 - pcin:129319224 763.837