Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1574g00001 ATGAGCATGAGTGAGAGCGATGCCGAGGAAGAATCGACACAAGAAGTTCAAGTCCCGGCTGATATTGATTGGCATATGCTTGATAAATCGAAGTTTTTCTTCCTTGGTGCTGCCCTTTTCTCAGGGGTTTCAGCAACTCTGTACCCGATTGTTGTATTGAAAACGAGGCAGCAAGTAGCTGAATCCCGAGTTTCTTGTATCCAAACTGCACTTTCACTTATTAGGAATGAGGGTTTTCGAGCATTGTACAGAGGTTTTGGTACTTCCTTGATGGGTACAATTCCAGCTCGAGCACTATATATGGCTGCCCTGGAGATTACAAAGAGTAATGTAGGCACTGTCACGGTTAGGTTAGGGCTTGCCGAACCAACTGCGGCTACTATCGCCAATGCTGCTGCAGGTTTGAGTGCTGCCATGGCAGCTCAACTCGTGTGGACCCCCGTTGATGTTGTGAGCCAAAGGTTGATGGTTCAAGGTGGTTGTAATTCAAATAATCCAAAGGCTTCGGCACATCTATATGTCAACGGGATTGATGCATTCAAGAAAATTCTGATCACAGATGGTCCCAGAGGTTTGTATAGGGGGTTTGGGATATCCATTTTGACATATGCACCCTCAAATGCAGTTTGGTGGGCTTCATACTCTGTTGCGCAAAGGCTGATTTGGAGTGGAGTTGGTTACTACTGGGGCAAGAAAGATGATAAGAACAGCGATTCTGTGGATGATGTATTAAGGCCAGATTCGAAAACTGTAATGGCAGTTCAGGGAGTCAGTGCAGCAATGGCTGGTGGCATGTCTGCCCTCATTACAATGCCACTAGACACGATCAAGACAAGACTTCAAGTCTTGGATGGTGATGAGAATGGCCGTCGAGGACCAACAGCTATGCAGACTGTGAGGAAATTGATTAAGGAAGGTGGTTGGATGGCCTGCTACAGAGGGTTGGGACCTCGATGGGCTTCAATGTCAATGTCTGCAACAACAATGATCACCACATATGAGTTTTTAAAACGGCTTTCAACAAAGAATCAAGAAGTTCTGACAAGGTAG 1050 0.459 MSMSESDAEEESTQEVQVPADIDWHMLDKSKFFFLGAALFSGVSATLYPIVVLKTRQQVAESRVSCIQTALSLIRNEGFRALYRGFGTSLMGTIPARALYMAALEITKSNVGTVTVRLGLAEPTAATIANAAAGLSAAMAAQLVWTPVDVVSQRLMVQGGCNSNNPKASAHLYVNGIDAFKKILITDGPRGLYRGFGISILTYAPSNAVWWASYSVAQRLIWSGVGYYWGKKDDKNSDSVDDVLRPDSKTVMAVQGVSAAMAGGMSALITMPLDTIKTRLQVLDGDENGRRGPTAMQTVRKLIKEGGWMACYRGLGPRWASMSMSATTMITTYEFLKRLSTKNQEVLTR 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1574g00001 349 Gene3D Mitochondrial carrier domain 31 347 IPR023395 -
Pral1574g00001 349 Pfam Mitochondrial carrier protein 127 221 IPR018108 -
Pral1574g00001 349 Pfam Mitochondrial carrier protein 253 343 IPR018108 -
Pral1574g00001 349 Pfam Mitochondrial carrier protein 39 109 IPR018108 -
Pral1574g00001 349 PRINTS Mitochondrial carrier protein signature 85 105 IPR002067 GO:0055085
Pral1574g00001 349 PRINTS Mitochondrial carrier protein signature 259 281 IPR002067 GO:0055085
Pral1574g00001 349 PRINTS Mitochondrial carrier protein signature 33 46 IPR002067 GO:0055085
Pral1574g00001 349 PRINTS Mitochondrial carrier protein signature 193 211 IPR002067 GO:0055085
Pral1574g00001 349 SUPERFAMILY Mitochondrial carrier 26 336 IPR023395 -
Pral1574g00001 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 250 339 IPR018108 -
Pral1574g00001 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 28 110 IPR018108 -
Pral1574g00001 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 125 220 IPR018108 -
Pral1574g00001 349 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 11 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1574g00001 Pral-Chr1574 1168 3143 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1574g00001 3 345 Chloroplast and Mitochondria Gene Families AT1G72820 72.254 2.08e-179 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1574g00001 K15121 - qsa:O6P43_027580 525.013