Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1573g00002 ATGTGCAAAGCAAACATATACAAGGTGAACAGATGGAGGGAAGCTCTGAAACAAGGGTGCCGTGTCTCTGGCCGCCGGAGTAACTCAGATAGGTTTATAGCAGTTTATTACGATGTGGATCCAAAATCCTTTGCTCAACATATTCAACAAGCATGCACACAAGATTCATTTGAGATAACCCAATGGGAGAGGAAGGTTATCGAACTAGTGGCCCCTGTCTGGCAAGTGCGGAATGACTCAGGGTTACAGGTTATTCCAAAAATTGTTAAAGAAGTCAAGTCTAAAATAGATAAACTATTTTATGACTTCTTCGGATTTGTTGGGATGCAATCTCAAGTGGAAGAAGTGGAAAAGCTTTTGGATTTGAATGCAGATGATGAAGTTCGAGTTGTTGGCATTTGTGGTATGAGCGGATTGGGGAAATCTTCTATTGCTACTGTTTTATATCTTAAGATCTTTCACTTTTTTGATGCCTTTTGTTTCCTTCCCAATCTAAGTGGACGTTTAAAGCACGGTGACATAACTCTACAAGAACTTCTGCATAGACATTTGATGACAGAGAATTCAGAGATGAAGGATTTTCTAGACAAAGAGTTCTTACGATGCAAAAGGTTAAGAAAGCACAAGTTTCTTATAGTTCTTGATGGTGTCGATGTTGTACAACATCTACAAGAGTTGAACTTAGTTCAAAAATCCAATTGTTTTGGCGGGGGAAGTAGAATCATTATAACAACTAGAGACGAACAAGTCCTTCAAAAATATGAGGTTAAAACCATTTATAGACCTAAACTTTTGTCCAAGGAGGAAGGTTTCGAACTACTTTGCTCTCAAGCTTTTCAAGGGGGATATCCTATTGGTGAATTCAGAGAGATGATAGATAGGGTGTTGGAATATGCTAATGGCCTTCCATTAGCAATTGAAATATTCGGTTCATCCTTTTTTGGAAAAGGCATTGCAGAATGGAGAAGTTTGCTGGATAGGGAAGAAATTATTCCTCCCTATGAGATCATAAGGGTGCTTAGAAAAAGTTTTGACGAACTTGATCACATGAGTAAGGAAATGTTTTTGGACATAGCATGTTTCTTTGTCGGGAAGGACATTAACTGTGTGAAGGAAATTTTACATGATTGCATCGATTGCTCTGTTGATATAGAAATTCTTATTCAGAAATCAGTCATCACAATTGCAAATGAGAGGATACAAATGCATAGTATGTTGCAAGCAATGGGGCGAGATATTATTCGACGACAATATCCGTATCAACAAAGCCGATTATACCTTTATGGTGACATTAAATCTGTTATGGAGAAGAAAAGAAACACGGTGATGAAAAATGTTGAAGCTCAGCCAGATGACATCGAATCTGTTAGTGAGAGACAGAGATACACATGGATGGTGGAAGGTGTTGAAGCTATAGCCTTGGATTTGGAAGAGCCAAAAATGGCTTCATTGAGGATTGATGGTTTATCACATATGATCAACCTTAGATTGCTGATATTCCGTAATGTGGAATTTTCTGGAACCCTCAATAATCTTTCAAGCAAGTTGCGATATGTTTCATGGCATCAATATCCTTTCACTTCTTTACCGTCGGGTTTTCAATCTGACACACTTGTTCAACTGATTATGCCTGAAAGCAGCATGACAGAAGTATGGAAGGGCAGAATGATGCTCCCTACTTTGAGAAAACTGAATCTAAGTGGCTCCAAAGCTTTGACAAAGACGCCAGATTTTGGTGGGGTTCCAAATCTTGAGAGGCTAGAGCTCGAAGGATGTACTGGATTGTTGCAACTTGATCGATATGTTGCTAAACTTCCACAGCTCAGATTCTTGAACTTGAAAGTTTTCTCCAATGAGGAGCTTGATACAAGTGAGGCTGCTTAG 1884 0.3896 MCKANIYKVNRWREALKQGCRVSGRRSNSDRFIAVYYDVDPKSFAQHIQQACTQDSFEITQWERKVIELVAPVWQVRNDSGLQVIPKIVKEVKSKIDKLFYDFFGFVGMQSQVEEVEKLLDLNADDEVRVVGICGMSGLGKSSIATVLYLKIFHFFDAFCFLPNLSGRLKHGDITLQELLHRHLMTENSEMKDFLDKEFLRCKRLRKHKFLIVLDGVDVVQHLQELNLVQKSNCFGGGSRIIITTRDEQVLQKYEVKTIYRPKLLSKEEGFELLCSQAFQGGYPIGEFREMIDRVLEYANGLPLAIEIFGSSFFGKGIAEWRSLLDREEIIPPYEIIRVLRKSFDELDHMSKEMFLDIACFFVGKDINCVKEILHDCIDCSVDIEILIQKSVITIANERIQMHSMLQAMGRDIIRRQYPYQQSRLYLYGDIKSVMEKKRNTVMKNVEAQPDDIESVSERQRYTWMVEGVEAIALDLEEPKMASLRIDGLSHMINLRLLIFRNVEFSGTLNNLSSKLRYVSWHQYPFTSLPSGFQSDTLVQLIMPESSMTEVWKGRMMLPTLRKLNLSGSKALTKTPDFGGVPNLERLELEGCTGLLQLDRYVAKLPQLRFLNLKVFSNEELDTSEAA 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1573g00002 627 Pfam NB-ARC domain 110 324 IPR002182 GO:0043531
Pral1573g00002 627 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 617 IPR044974 GO:0006952
Pral1573g00002 627 Gene3D Ribonuclease Inhibitor 469 624 IPR032675 -
Pral1573g00002 627 SUPERFAMILY L domain-like 473 614 - -
Pral1573g00002 627 Gene3D - 265 355 IPR042197 -
Pral1573g00002 627 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 100 358 IPR027417 -
Pral1573g00002 627 Gene3D - 96 259 IPR027417 -
Pral1573g00002 627 SUPERFAMILY "Winged helix" DNA-binding domain 335 434 IPR036390 -
Pral1573g00002 627 PRINTS Disease resistance protein signature 556 572 - -
Pral1573g00002 627 PRINTS Disease resistance protein signature 204 218 - -
Pral1573g00002 627 PRINTS Disease resistance protein signature 299 313 - -
Pral1573g00002 627 PRINTS Disease resistance protein signature 130 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1573g00002 Pral-Chr1573 33708 36497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1573g00002 107 613 WRKY Transcription Factor Family AT5G45050 30.303 2.20e-59 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1573g00002 - - pcin:129300842 744.962