Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1569g00008 ATGGGCGGGGCTATGTCGCCGTCCAAATGTTCCACTGTCGGCGTTCAAGGCATTGCTTGGGCATTTGGCGGCATGATCTTTGCTCTTGTTTATTGCACTGCCGGTATCTCGGGGGGTCACATTAACCCAGCTGTGACATTTGGGCTGTTCTTGGCAAGGAAGGTATCACTGACCAGGGCGGTGTTGTACATAACAATGCAATGCTTGGGAGCTACATGTGGTGTCGCAGTTGTGAAGGGGTTTGAAGGAAGCCAGTATGAGAGGCTTGGAGGGGGTGCCAATAGTCTTAGTGAAGGATACTCCTCAATTAGTGGCCTTGGTGCAGAAATCATCGGCACTTTTGTGCTTGTCTATACTGTCTTCTCAGCCACTGATGCCAAACGAAACGCTCGAGACGCGCACGTCCCTATCTTGGCACCACTGCCTATTGGGTTTGCTGTGTTTGTGGTGCATTTGGCTACAATTCCTATCACGGGGACTGGGATCAACCCTGCTAGGAGTCTGGGTACAGCACTCGTTTTCAACAAGGATCAAGTTTGGGACGACCATTGGATCTTCTGGGTGGGGGCCTTTCCTTGGGGCCGGACTTGCAGCTTTGTATCATGA 606 0.5165 MGGAMSPSKCSTVGVQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKVSLTRAVLYITMQCLGATCGVAVVKGFEGSQYERLGGGANSLSEGYSSISGLGAEIIGTFVLVYTVFSATDAKRNARDAHVPILAPLPIGFAVFVVHLATIPITGTGINPARSLGTALVFNKDQVWDDHWIFWVGAFPWGRTCSFVS 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1569g00008 201 ProSitePatterns MIP family signature. 40 48 IPR022357 -
Pral1569g00008 201 Gene3D Glycerol uptake facilitator protein. 1 192 IPR023271 -
Pral1569g00008 201 Pfam Major intrinsic protein 12 191 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral1569g00008 201 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 6 191 IPR034294 -
Pral1569g00008 201 PRINTS Major intrinsic protein family signature 108 126 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral1569g00008 201 PRINTS Major intrinsic protein family signature 184 201 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral1569g00008 201 PRINTS Major intrinsic protein family signature 144 166 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral1569g00008 201 PRINTS Major intrinsic protein family signature 22 46 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral1569g00008 201 PRINTS Major intrinsic protein family signature 59 78 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral1569g00008 201 SUPERFAMILY Aquaporin-like 7 191 IPR023271 -
Pral1569g00008 201 NCBIfam MIP family channel protein 10 191 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral1569g00008 201 CDD MIP 14 191 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1569g00008 Pral-Chr1569 36340 37273 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1569g00008 1 191 Major Intrinsic Protein MIP AT3G61430 80.628 3.54e-114 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1569g00008 K09872 - cave:132192212 347.051