Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1569g00005 ATGGACGTGAATAAGTCGCCGCAAATGTCGTCGGGGCCCATCAAGAAGGTGTTAATACACCCTCTGGTTCTTCTAAGCATCGTCGATCACTACAATCGTGTCTCCCAGCAATCGTTTAGGCGGGTCGTCGGAGTCTTGCTCGGCACCTCCTTCCAAGGCATTGTCGATGTTTCCAACAGCTATGCAGTTCCTTTTGAGGAAGAAGTCACGGACCCAAGTGTCTGGTCCCTTAACCACAACTACCATGAGGCAATGCTTTCTATGTTCAAGAAAATAAATGGGACTCTTGGTGGCTATGTTTCAGATAAGGAGCATGTTGTGGGATGGTACAGTACAGGCCCAAAACTTCGAGCAAATGATCTGGACATACATAGATTATTCCACAACTATGTTCCAAATCCGATCTTGGTCATTACTGATGTGCGATCTAGGGAGCCAGGTATCCCAACAAATGCTTACTATGATGTTGAAGAAGGGAAGGAGAATCCTACCCAAAAAAGTCAGAAGGTTTTTGTTCATGTCCCTTCGGAAATTGCTGCTGATGAGGTTGAGGAAATTGGAGTTGGACACTTGTTAAGAGATGTGAAAGATACAACCATCAGTACACTTGCAACTGAGGTTTCTGATAAACTTACAGCCATTAAGGGTTTAGATGCTAGATTAAGAAGGATAAGTTGGTACCTTGGTTTGCTTATTATTGGATGGTATCCATTAAACCATGAGGTACTCTGCCATCTGCAGTTGAGATTCGCAGGATGTGGTCAACCACTGTCCGAATCTGAATGTTCCTGA 792 0.4432 MDVNKSPQMSSGPIKKVLIHPLVLLSIVDHYNRVSQQSFRRVVGVLLGTSFQGIVDVSNSYAVPFEEEVTDPSVWSLNHNYHEAMLSMFKKINGTLGGYVSDKEHVVGWYSTGPKLRANDLDIHRLFHNYVPNPILVITDVRSREPGIPTNAYYDVEEGKENPTQKSQKVFVHVPSEIAADEVEEIGVGHLLRDVKDTTISTLATEVSDKLTAIKGLDARLRRISWYLGLLIIGWYPLNHEVLCHLQLRFAGCGQPLSESECS 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1569g00005 263 SMART pad1_6 16 158 IPR000555 GO:0005515|GO:0008233|GO:0008237
Pral1569g00005 263 FunFam 26S proteasome non-ATPase regulatory subunit 7 9 202 - -
Pral1569g00005 263 Pfam Maintenance of mitochondrial structure and function 182 247 IPR024969 -
Pral1569g00005 263 Gene3D Cytidine Deaminase, domain 2 9 202 - -
Pral1569g00005 263 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 12 247 - -
Pral1569g00005 263 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 15 132 IPR000555 GO:0005515|GO:0008233|GO:0008237
Pral1569g00005 263 ProSiteProfiles MPN domain profile. 17 159 IPR037518 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1569g00005 Pral-Chr1569 9231 12114 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1569g00005 6 140 Eukaryotic Initiation Factors Gene Family AT2G39990 37.410 4.91e-17 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1569g00005 K03038 - qsu:112031008 368.237