Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1568g00005 GGTCACCATGAACGGAAGGCCAACGTTTCTAAAGAGCTCAACGCAAAGCATAAAAGGTTTTTTTGTTTTATATTGGAAGGACTTCTTAAACTGCCAGAAAATAGGGAATGTGCTGACTGCAAAGCTAAAGGTCCAAGGTGGGCTATTGTGAACCTAGGCATCTTTATCTGCATGCAGTGTTCAGGAATACATCGAAGTCTTGGGGTACATATTTCAAAGGTTCGGTCTGCAACTTTGGATACCTGGCTTCCAGAGCAGGTTGCATTCATTCAATCCATGGGAAATGAAAAAGCTAATTCTTACTGGGAAGCAGACTACCCCCATTATGATAGAGTTGGAATAGAGAATTTTATTCGTGCAAAGTATGTCTGA 372 0.414 GHHERKANVSKELNAKHKRFFCFILEGLLKLPENRECADCKAKGPRWAIVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAFIQSMGNEKANSYWEADYPQXYDRVGIENFIRAKYV 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1568g00005 124 Pfam Putative GTPase activating protein for Arf 25 124 IPR001164 GO:0005096
Pral1568g00005 124 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 5 124 IPR044520 GO:0005096
Pral1568g00005 124 SUPERFAMILY ArfGap/RecO-like zinc finger 24 124 IPR037278 -
Pral1568g00005 124 Gene3D Arf GTPase activating protein 2 124 IPR038508 -
Pral1568g00005 124 CDD ArfGap 25 123 - -
Pral1568g00005 124 SMART arf_gap_3 7 124 IPR001164 GO:0005096
Pral1568g00005 124 PRINTS HIV Rev interacting protein signature 74 95 IPR001164 GO:0005096
Pral1568g00005 124 PRINTS HIV Rev interacting protein signature 34 53 IPR001164 GO:0005096
Pral1568g00005 124 PRINTS HIV Rev interacting protein signature 53 70 IPR001164 GO:0005096
Pral1568g00005 124 ProSiteProfiles ARF GTPase-activating proteins domain profile. 22 124 IPR001164 GO:0005096
Pral1568g00005 124 FunFam stromal membrane-associated protein 1 isoform X1 3 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1568g00005 Pral-Chr1568 35526 38566 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1568g00005 25 123 C2H2 Transcription Factor Family AT4G05330 49.533 3.58e-29 106