LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral1568g00003	ATGAGTCTCGGTATCAGCTACTATGGAGGTCATGGTCTTCCATCTTTGAGAATATCTAACTGCAATATTGACCAAGATAGCCGTAACAGAAAATCTGTTGTCCCCATGAACGCGCACAAGAAAATTTCCAAGCCTGAGAATCTTTTACCATCAAGTTGGAAGGTTGACAGCACCAGCATAATGGCCGTGATAGGTTCCATCACAGTGGCCAACTTGATTGCACCAGTTGCTGCGAAGGCTGAAGTGATTGGTTCCGTTTATGCTTTGGCTGATGGAAGCTTGGGTGATTGGTTTGGAGGCTTGCTATATTCAGCCGGACAACAGGCCAATGTAGCTGTTCAAGATCAATTAGGTTCTCTCAGCTTCACCAGTTTAGCAGTAATTTATGGGGCGGGGCTTGTTACCAGCCTTTCACCCTGTACACTAAGTGTCTTACCTCTAACTCTTGGTTACATTGGGGCATTTGGGTCTGGCAAAAGCAGGGCAGAGGTTATTGGTGATTCTGTGGCATTTTCTTTAGGTCTTGCCACCACATTAGCACTGTTGGGTGTAGCAGCATCATTTGCTGGAAAGGCTTATGGACAGATAGGCCAAGGACTACCTTTGGCCGCTTCTGGTCTGGCAATAGTTATGGGTCTGAACCTTCTTGAGATCATTGAATTACGGCTTCCCTCATTTTTTGACAATTTTGATCCACGTGCAGCAGCTGCCAATTTACCATCAAGTGTGCAAGCATATCTAGCTGGGCTTACCTTTGCTCTAGCTGCCTCACCCTGTAGTACACCTGTGCTGGCTACTATTCTGGGATATGTTGCTGCGTCAAAGGATCCAGTGATTGGAGGTAGCTTACTTTTGACATACACAACTGGTTATGTTTCTCCTTTACTCTTAGCTGCTTCTTTCGCTGGGGCATTACAGAGCCTGCTTTCATTTCGCAAGTTCTCAGCATGGATCAATCCTATGAGTGGAGCACTTCTGTTAGGAGGTGGTCTGTACACTTTCATGGATAGGGTATTCCCAACAACAATGGTGATGTAG	1038	0.4586	MSLGISYYGGHGLPSLRISNCNIDQDSRNRKSVVPMNAHKKISKPENLLPSSWKVDSTSIMAVIGSITVANLIAPVAAKAEVIGSVYALADGSLGDWFGGLLYSAGQQANVAVQDQLGSLSFTSLAVIYGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAEVIGDSVAFSLGLATTLALLGVAASFAGKAYGQIGQGLPLAASGLAIVMGLNLLEIIELRLPSFFDNFDPRAAAANLPSSVQAYLAGLTFALAASPCSTPVLATILGYVAASKDPVIGGSLLLTYTTGYVSPLLLAASFAGALQSLLSFRKFSAWINPMSGALLLGGGLYTFMDRVFPTTMVM	345

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral1568g00003	345	PANTHER	CYTOCHROME C-TYPE BIOGENESIS PROTEIN HI_1454-RELATED	119	344	-	-
	Pral1568g00003	345	Pfam	Cytochrome C biogenesis protein transmembrane region	129	334	IPR003834	GO:0016020\|GO:0017004

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral1568g00003	Pral-Chr1568	22767	27136	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral1568g00003	19	345	Chloroplast and Mitochondria Gene Families	AT5G54290	71.554	4.07e-144	410

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral1568g00003	-		-	gmx:100807029	542.732