Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1566g00011 ATGGATAGGGATGCCAATTGTTTGGAGGCAACTAGATCATTCATGTCATCTGTTTGGAGGGAAGGCAGTCGCGCTATCAATCTCATCGCGATCTCCCTTCTGTGCATAGTGGGGATAGCAATGGCTTTGCGTGGACATCGGACCCTACTCATTATTTTCGGCAACGTGGTCGGGGTCATTGGCCTTGCATTACTTACCATGTTACTACCTCGTATTGAGGACGCGGATAAGTTTCTGACATTTACTATGGAAAAGTTTCTGAATGATTTAGAAAGACAAGGCCCAACAAAGTTCACATCATATGACATAATGAGCGCAACGAACAACTACACCACCATGTTGGCGTCGGGAGGCTTTGGATCAGTTTATAAAGGAACATTTATTGATGGATCTGTTGCGGCAGTGAAAGTTCTACGTGGTGGCGTTTCTGCCAAGAGAATGGAGGAGCAATTCATGGCTGAAGTTGGCACAATTGGGAGAGTTCATCATATGAATCTGGTTCGCCTCATTGGATTCTGCGTTGAAAAGGATACGACAGCTCTAGTTTATGAGTACATGAGCAATGGCTCTCTTGACAAACATCTGTTTGCTAGTGAAAAGAATAAGAACTTGGCATTTGAGAAGCTTCATGAGATTGCGGTTGGAACAGCCAGAGGGATTGCTTACTTGCATGAAGAATGCCAAGAGAGGATCATCCACTATGACATAAAACCTCAAAACATCCTCTTGGACCATAATTTGCATCCTAAAGTTTCTGATTTTGGTTTAGCTAAGCTTTGTAGCAGCGAAAAATCTTATGTCACAATGACAGGTCTTAGAGGGACGCCGGGTTATGCTGCACCAGAACTTTGGATGCCTTTCCGTGTAACTCACAAATGCGATCTTTATAGTTTTGGAATGTTGTTGTTTGAAATCGTAGGAAGAAGAAGAAACCTCGCGGGGAACGTCCCAGAAAGTCAAGAGTGGCTTCCTATGAGGGGTTGGAAAAAGTTTGAGAGTGAAAATCTAAGAGATTTGATAACAGGTTGTGGTATTGAAGATAAAGACGAAGAGATGGCAGAAAGAATGGTAAAAATAGCTCTGTGGTGTGTTCAGTATAAACCAGAATTGAGACCTAAGATGAGTGATGTGGTGAAAATGTTGGAAGGCTCCATGGATGTTGCAGACCCTTCAAACCCATTTCAACACTTGATGGATGAGGCAGATCAAGTGGATAGTAGTATTGATGGTGGCTTATCTACTCTTGAAGGAACTGAATCTTCCATTTGTAATAGTACAAGAATGAAAAAACAAAGGACGTACCCAGACTGCAGGACCAGAAAATGTTTTTCTTGCAGAAACAGGGATTCAAATATTGGTTCATCACGTTACGAAAGACTAGTACCTTTTGCTAAACACTGTGCAAAGAGTTTTTATCCGAAAAAGGAAAAGAAACGAAGGTGA 1443 0.4207 MDRDANCLEATRSFMSSVWREGSRAINLIAISLLCIVGIAMALRGHRTLLIIFGNVVGVIGLALLTMLLPRIEDADKFLTFTMEKFLNDLERQGPTKFTSYDIMSATNNYTTMLASGGFGSVYKGTFIDGSVAAVKVLRGGVSAKRMEEQFMAEVGTIGRVHHMNLVRLIGFCVEKDTTALVYEYMSNGSLDKHLFASEKNKNLAFEKLHEIAVGTARGIAYLHEECQERIIHYDIKPQNILLDHNLHPKVSDFGLAKLCSSEKSYVTMTGLRGTPGYAAPELWMPFRVTHKCDLYSFGMLLFEIVGRRRNLAGNVPESQEWLPMRGWKKFESENLRDLITGCGIEDKDEEMAERMVKIALWCVQYKPELRPKMSDVVKMLEGSMDVADPSNPFQHLMDEADQVDSSIDGGLSTLEGTESSICNSTRMKKQRTYPDCRTRKCFSCRNRDSNIGSSRYERLVPFAKHCAKSFYPKKEKKRR 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1566g00011 480 Pfam Protein tyrosine and serine/threonine kinase 112 381 IPR001245 GO:0004672|GO:0006468
Pral1566g00011 480 Gene3D Phosphorylase Kinase; domain 1 78 185 - -
Pral1566g00011 480 FunFam Putative receptor-like protein kinase 186 389 - -
Pral1566g00011 480 PANTHER OS07G0415500 PROTEIN 51 394 - -
Pral1566g00011 480 Gene3D Transferase(Phosphotransferase) domain 1 186 401 - -
Pral1566g00011 480 ProSiteProfiles Protein kinase domain profile. 108 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1566g00011 480 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
Pral1566g00011 480 SMART serkin_6 108 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1566g00011 480 FunFam serine/threonine-protein kinase PBS1-like 81 185 - -
Pral1566g00011 480 SUPERFAMILY Protein kinase-like (PK-like) 91 382 IPR011009 -
Pral1566g00011 480 CDD STKc_IRAK 114 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1566g00011 Pral-Chr1566 87599 91086 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1566g00011 97 409 Receptor kinase-like Gene Family AT5G38280 42.105 1.30e-76 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Pral1566g00011 PK_Tyr_Ser-Thr 6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1566g00011 - - pcin:129297340 468.388