Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1566g00010 ATGGATAGGGATGCCAATTGTTTGGAGGCAACTAGATCATTCATGTCATCTGTTTGGAGGGAAGGCAGTCGCGCTATCAATCTCATCGCGATCTCCCTTCTGTGCATAGTGGGGATAGCAATGGCTTTGCGTGGACATCGGACCCTACTCATTATTTTCGGCAACGTGGAAAGACAAGGCCCAACAAAGTTCACATCATATGACATAATGAGCGCAACGAACAACTACACCACCATGTTGGCGTCGGGAGGCTTTGGATCAGTTTATAAAGGAACATTTATTGATGGATCTGTTGCGGCAGTGAAAGTTCTACGTGGTGGCGTTTCTGCCAAGAGAATGGAGGAGCAATTCATGGCTGAAGTTGGCACAATTGGGAGAGTTCATCATATGAATCTGGTTCGCCTCATTGGATTCTGCGTTGAAAAGGATACGACAGCTCTAGTTTATGAGTACATGAGCAATGGCTCTCTTGACAAACATCTGTTTGCTAGTGAAAAGAATAAGAACTTGGCATTTGAGAAGCTTCATGAGATTGCGGTTGGAACAGCCAGAGGGATTGCTTACTTGCATGAAGAATGCCAAGAGAGGATCATCCACTATGACATAAAACCTCAAAACATCCTCTTGGACCATAATTTGCATCCTAAAGTTTCTGATTTTGGTTTAGCTAAGCTTTGTAGCAGCGAAAAATCTTATGTCACAATGACAGGTCTTAGAGGGACGCCGGGTTATGCTGCACCAGAACTTTGGATGCCTTTCCGTGTAACTCACAAATGCGATCTTTATAGTTTTGGAATGTTGTTGTTTGAAATCGTAGGAAGAAGAAGAAACCTCGCGGGGAACGTCCCAGAAAGTCAAGAGTGGCTTCCTATGAGGGGTTGGAAAAAGTTTGAGAGTGAAAATCTAAGAGATTTGATAACAGGTTGTGGTATTGAAGATAAAGACGAAGAGATGGCAGAAAGAATGGTAAAAATAGCTCTGTGGTGTGTTCAGTATAAACCAGAATTGAGACCTAAGATGAGTGATGTGGTGAAAATGTTGGAAGGCTCCATGGATGTTGCAGACCCTTCAAACCCATTTCAACACTTGATGGATGAGGCAGATCAAGTGGATAGTAGTATTGATGGTGGCTTATCTACTCTTGAAGGAACTGAATCTTCCATTTGTAATAGTACAAGAATGAAAAAACAAAGGACGTACCCAGACTGCAGGACCAGAAAATGTTTTTCTTGCAGAAACAGGGATTCAAATATTGGTTCATCACGTTACGAAAGACTAGTACCTTTTGCTAAACACTGTGCAAAGAGTTTTTATCCGAAAAAGGAAAAGAAACGAAGGTGA 1341 0.4221 MDRDANCLEATRSFMSSVWREGSRAINLIAISLLCIVGIAMALRGHRTLLIIFGNVERQGPTKFTSYDIMSATNNYTTMLASGGFGSVYKGTFIDGSVAAVKVLRGGVSAKRMEEQFMAEVGTIGRVHHMNLVRLIGFCVEKDTTALVYEYMSNGSLDKHLFASEKNKNLAFEKLHEIAVGTARGIAYLHEECQERIIHYDIKPQNILLDHNLHPKVSDFGLAKLCSSEKSYVTMTGLRGTPGYAAPELWMPFRVTHKCDLYSFGMLLFEIVGRRRNLAGNVPESQEWLPMRGWKKFESENLRDLITGCGIEDKDEEMAERMVKIALWCVQYKPELRPKMSDVVKMLEGSMDVADPSNPFQHLMDEADQVDSSIDGGLSTLEGTESSICNSTRMKKQRTYPDCRTRKCFSCRNRDSNIGSSRYERLVPFAKHCAKSFYPKKEKKRR 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1566g00010 446 Gene3D Transferase(Phosphotransferase) domain 1 152 367 - -
Pral1566g00010 446 Pfam Protein tyrosine and serine/threonine kinase 78 347 IPR001245 GO:0004672|GO:0006468
Pral1566g00010 446 SMART serkin_6 74 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1566g00010 446 SUPERFAMILY Protein kinase-like (PK-like) 59 348 IPR011009 -
Pral1566g00010 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Pral1566g00010 446 Gene3D Phosphorylase Kinase; domain 1 45 151 - -
Pral1566g00010 446 ProSiteProfiles Protein kinase domain profile. 74 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1566g00010 446 FunFam Putative receptor-like protein kinase 152 355 - -
Pral1566g00010 446 CDD STKc_IRAK 80 349 - -
Pral1566g00010 446 PANTHER OS07G0415500 PROTEIN 55 360 - -
Pral1566g00010 446 FunFam serine/threonine-protein kinase PBS1-like 53 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1566g00010 Pral-Chr1566 87373 91086 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1566g00010 55 375 Receptor kinase-like Gene Family AT5G38280 42.771 9.41e-78 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Pral1566g00010 PK_Tyr_Ser-Thr 4.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1566g00010 - - gmx:100803355 448.743