Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1566g00008 ATGAAGAAAGCACCAACAACCCAGATTTCAACAACAGATCATCACAATAACATGCATTCTTCAAACAACAAGGAAATCGTGTTAGTAAAACCGCCAGATTCAGATTCACAGGTACTGGAGTTCGCAACCATGGAAAGATTCCTCAACAACATCAACCGAGAGAAACCCATCAGATTCTCACCTGAGCAACTTGAAGAAATCACAGACAACTACACCACTGTTCTGGGGTCTGGTGCTTTTGGGGAGGTTTATAAAGGTGAATTGTCCAATGGACAGCAAGTTGCAGTGAAAGTTCTCAACAGTTTGGATCTTGGCGCAGAAGAGCAATTCAAAGCAGAAGTTAGCACTATTGGAAGAACTTACCATATCAATGTAGTTATGCTATATGGCTTCTGCTTCCACCGTGAAAAGAGAGCTCTTATATACGAGTTTGTGCAAAATGGGTCTCTCAACAACTTATTATTTGGCACTCTGAACACAGAAATCCAGTTTGGGAAGCTTCATGAGATTGCAATTGGAACAGCAAGAGGAATTGCCTACTTACATGAAGAGTGTCAACAAAGAATCATTCATTACGATATTAAACCAGAGAATATACTTCTGGGCCAGAACTTGGAACCAAAAGTTGCAGATTTTGGTCTTGCAAAACATTGTAGCAGAGAAAGAAGCCGCGTGAATATGTCTCAGTTCAGAGGAACAAGAGGGTATGCTGCACCAGAATTATGGAAGTGTTATCCTGTGAATCATAAGTGTGATGTTTATAGTTTTGGCATTGTCCTCTTTGAGATTGTAGGGAGAAGAAGGCATTTTGATTGTGGCTACAGTGAATCACAACAATGGCTTCCAAAATGGACATGGGATATGTTTGAGAATAATGAACTACCAATGATGATTTCGCTGTTTGGGATTGAAAAAGAGAAAGACAGGGAAAAGGCCAAGAGAATGTTAATGGTGGCCCTTTGGTGTGTTCAATATTTGCCTACTGATAGGCCTCTTATGAGTAATGTGGTGAAGATGTTGGAAGGTGATATAGAAATCGCTGCCCCGCCATTTCCCTTTCAGAATTTGGTGGCTGCTAAACCAAGTTTTACACCAAAGGGAACCGATGCAGATTCAGATGCTTCTTATTCAGTAGTGGCAGAACCTTCTGATGAGCAATGCAGTTCTAAACCGGTGCAAAATATAGATACCGTATAG 1197 0.4085 MKKAPTTQISTTDHHNNMHSSNNKEIVLVKPPDSDSQVLEFATMERFLNNINREKPIRFSPEQLEEITDNYTTVLGSGAFGEVYKGELSNGQQVAVKVLNSLDLGAEEQFKAEVSTIGRTYHINVVMLYGFCFHREKRALIYEFVQNGSLNNLLFGTLNTEIQFGKLHEIAIGTARGIAYLHEECQQRIIHYDIKPENILLGQNLEPKVADFGLAKHCSRERSRVNMSQFRGTRGYAAPELWKCYPVNHKCDVYSFGIVLFEIVGRRRHFDCGYSESQQWLPKWTWDMFENNELPMMISLFGIEKEKDREKAKRMLMVALWCVQYLPTDRPLMSNVVKMLEGDIEIAAPPFPFQNLVAAKPSFTPKGTDADSDASYSVVAEPSDEQCSSKPVQNIDTV 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1566g00008 398 MobiDBLite consensus disorder prediction 379 398 - -
Pral1566g00008 398 SUPERFAMILY Protein kinase-like (PK-like) 51 341 IPR011009 -
Pral1566g00008 398 PANTHER OS07G0415500 PROTEIN 44 353 - -
Pral1566g00008 398 MobiDBLite consensus disorder prediction 364 398 - -
Pral1566g00008 398 MobiDBLite consensus disorder prediction 1 24 - -
Pral1566g00008 398 FunFam serine/threonine-protein kinase PBS1-like 40 144 - -
Pral1566g00008 398 FunFam Putative receptor-like protein kinase 145 348 - -
Pral1566g00008 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Pral1566g00008 398 Pfam Protein kinase domain 73 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1566g00008 398 ProSitePatterns Protein kinases ATP-binding region signature. 75 97 IPR017441 GO:0005524
Pral1566g00008 398 ProSiteProfiles Protein kinase domain profile. 69 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1566g00008 398 Gene3D Phosphorylase Kinase; domain 1 41 144 - -
Pral1566g00008 398 SMART serkin_6 69 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1566g00008 398 Gene3D Transferase(Phosphotransferase) domain 1 145 347 - -
Pral1566g00008 398 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1566g00008 Pral-Chr1566 80504 82047 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1566g00008 58 373 Receptor kinase-like Gene Family AT5G38280 42.284 2.69e-83 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Pral1566g00008 Pkinase 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1566g00008 - - pcin:129320890 611.298