Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1565g00002 ATGGACGATACTTCGAAGAACAAATATGGATCTTCCTCTGACCCATCCATGAAAAATAAGGCTAAACAATTGGTTGATGATCTTCAAGGAATCTTTACCAAGCTTCGATCTGCAAGAGAAGAGAATAGGTCTAATGATATAATTATCTACGAGGAGCTGGTGCATCAGACTCTTCAAGAGTGGAAAACAGAATTGAACGCGCCATCTCCAGCCTCCTCCTTAGCTGATGGAAATCTTGGATTATTTTCTGAGGAGTTGGCCCAGCTTTTGCAAGAGCTTGAGGAGGAAGACGATGCGACTAGTGAACTGGCAAAGAGTGCGCCATTGAAGACTGAGCCAGATCTTCATAACATCAACGAAACCAACCGTTCATCATTTCAGGAAAAGTGTTCTGATGAGAACCAACAAGGTCATGTTCTGGAAGACTTTTGCCAATATGAAGGCGCTGCTCCAACTCCAAACAGAAAAAATGCTGTTAATAGCTTAGATATGATTACTCAACCGGATAACCATCAACTCAGTTTGAATCAAGATGTAAATTACTTCAGAGGAGGTCATAACTCTGATTTGATTGAACTGTGCAATATATATCAGGAATGCAGGCAAAATTCAGCCATAAAAAGCACAGACCCAGATCAATTTACTTTAGATGAGGATTTTGATTGCGATGTGTTTGTTGGAGCTGATGATATCCAACAGTCTGGAGAGGATTTTTTGCCTAATATTCTTCCGAATATATGCCCTCCACCTTCTGCTTTTTTAGGCCCAAAATGTGCTTTATGGGATTGCTTTAGGCCAGCTCAAGGGTTAAAATGTTGCCAGGACTACTGCTGCAGTTCTCATGAGATTTTGGCAAATAATGAGGGTCTTCCCGGCATGACTCCAATTTTGCGTCCTGGGGGCATTGATGTTAAGGATGGTCCTTTGTTCGCTGCTGTTAATGCGAAGACACTAGGTAAGGAGGTGGGCATCCCCAATTGTGAAGGTGCTGCTTCAACTAAATCCCCCTGGAATGCTCCTGAGTTATTTGATCTTTCTCTTTTCAAGGGTGAAACGGTGCGGGAATGGCTGTTTTTTGACAAGCCTAGAAGGGCTTTTGATAGTGGAAATAGAAAACAAAGATCACTCCCCGATTACAGCGGACGTGGCTGGCATGAATCAAGGAAGCAAGTGATGAAGGAATATGAGGGACAGAAGAGGTCCTATTACATGGACCCTCAGCCCCTAAGTTATCTTGAGTGGCATTTGTACGAATATACGGTCAATAAGTATGATGGTTACGCATTATACAGACTGGAATTAAAGCTTGTAGATAAAAAGAAAAGTCCTAAAGGAAAAGTGACGAAGGAATCTCTTGCTGATATACAGAACAAGATGGGAAAGCTAAGTGCCGATGCTCCGTGA 1404 0.4231 MDDTSKNKYGSSSDPSMKNKAKQLVDDLQGIFTKLRSAREENRSNDIIIYEELVHQTLQEWKTELNAPSPASSLADGNLGLFSEELAQLLQELEEEDDATSELAKSAPLKTEPDLHNINETNRSSFQEKCSDENQQGHVLEDFCQYEGAAPTPNRKNAVNSLDMITQPDNHQLSLNQDVNYFRGGHNSDLIELCNIYQECRQNSAIKSTDPDQFTLDEDFDCDVFVGADDIQQSGEDFLPNILPNICPPPSAFLGPKCALWDCFRPAQGLKCCQDYCCSSHEILANNEGLPGMTPILRPGGIDVKDGPLFAAVNAKTLGKEVGIPNCEGAASTKSPWNAPELFDLSLFKGETVREWLFFDKPRRAFDSGNRKQRSLPDYSGRGWHESRKQVMKEYEGQKRSYYMDPQPLSYLEWHLYEYTVNKYDGYALYRLELKLVDKKKSPKGKVTKESLADIQNKMGKLSADAP 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1565g00002 467 PANTHER TRANSCRIPTION FACTOR VOZ1 1 467 IPR039277 GO:0006355|GO:0048578
Pral1565g00002 467 MobiDBLite consensus disorder prediction 94 118 - -
Pral1565g00002 467 Coils Coil 79 103 - -
Pral1565g00002 467 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1565g00002 Pral-Chr1565 3765 6712 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1565g00002 5 467 VOZ-9 Transcription Factor Family AT1G28520 51.812 6.49e-153 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Pral1565g00002 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1565g00002 - - psat:127101646 600.512