Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1555g00004 ATGCGAGAGAAATCAGCACATTTTGACTGCATAGATGAGATGACTCATTCAGATATGGATCGGCGAAGGCATGGGAATTCTAATTCTGAACCTTCTACCGTTGTGAGTAGTGCCAACATTTTGCGGCCAAATATCCGCGCAGTGGCAATGGCTTCAGGGAACACGAGTAATGTTGATTCCCACTATTCACCAGATGTCTATGACACTGCAGTAATGCATAGAGGGACACAATACAATGCCATTCAAAATCAACGTAATCTTGATATGGGTGTTGCAGCTGTGGCCAACTTGCATTATTCTGGCATGAATCCTTCTTCTAGTACTGGTGTATTACCGCTTCCTTCAAATCACGGAGCCTATGATCAGTTGCCAGCGTCAACCACATTTGCTGTATACGGAGTTTCTTCAGATAATTTTGGGAGGATCAGCAGCTATGCAGATGACGTCAGAGCTTCATTCAAAAGGAAAAATGCTGAAACTGTCAGGGGCAATTTCCCACATTTTGATGCCTCAGCTAGTTCTTCAGTCGTTCCCCCAGATGCAAGGCACTCTGACGGGGTTACTATTATGGATACTGCTTCCTTGCCCCCTCCTCAATTCCGAGGAAATAGCATCCCTTCACCCATGGACTTAGGTCCCTTTGGTAGTTTGTGGAGCAGGTCAGGTGAGTCTGTTATGGTGCATGAACATAGCCATTTGATTCAAGGTAATTATTTAGGGCAGCCCTTCCAGCCAGTTGCTCCTCCCTGGTTGGATCAACAGTTGAACAACAGTCACAGTGATGGGCATGCTACAGCTTGGAATCAGTCTCTTCCAATGCCTTACGTGCAAGCACCCAATGTTAATGGAAGTTCATTGGAGAATGCAACTATGGGTTTGCAGAGATATCATGATTCAGCTAGTAACATTAATGGCCTCAGGTTTGTTCATCCTCTTGTCAACCACCAGTACCATAATTATCATCATCCAGCAGTACCAATGAGAGGATTCAGAGGCCACAATATCATGTTTCAACCTCCAGTAACTGCAGCTTCTTATAGAGTTCCTACAAATCCTTTACGCAATGCTGTGATCCCTGCACAGAATGGTTTTGAGATGGGTCATAGGCCTGTTGGCCTTGTACCTTCAGCAGGCCTACAGGTATATCGTCCTCATAGAGGATACATGAATGAGACAACAATTGGGCATCAAAATCTTCACCCTATGGGCTATCTCCAAGTTGATGATGTTGCAATACTGGATGAAGTGGGATTGGTCGACCATCACAGAGATATGCGCTTGGACATTGAGGATATGTCTTACGAGGAGCTTCTCGCATTGAGTGAGCGAATTGGCAACGTAAGCACTGGTTTATCAGAAGAGTCCATTTCAGCTTTAATGAAAACTAGAATTTATGCAACACCCACTATTATTAACCTGGAAGAGGAAGAAGCTTCAGAGGATCAGGAAACTGATTCATGCACAATATGCCTGGAGAAATATGAGAACAAACAGAAGATAGGAATTCTTCAATGCGGTCATGAGTATCATGCACATTGCTTGAAGAGATGGCTTAAGGAGAAAAATGTATGTCCCATATGCAAATCAGAAGCATTGAGTCCGGGAAAGGACAAGGATATAAAAACCAAATGA 1632 0.4387 MREKSAHFDCIDEMTHSDMDRRRHGNSNSEPSTVVSSANILRPNIRAVAMASGNTSNVDSHYSPDVYDTAVMHRGTQYNAIQNQRNLDMGVAAVANLHYSGMNPSSSTGVLPLPSNHGAYDQLPASTTFAVYGVSSDNFGRISSYADDVRASFKRKNAETVRGNFPHFDASASSSVVPPDARHSDGVTIMDTASLPPPQFRGNSIPSPMDLGPFGSLWSRSGESVMVHEHSHLIQGNYLGQPFQPVAPPWLDQQLNNSHSDGHATAWNQSLPMPYVQAPNVNGSSLENATMGLQRYHDSASNINGLRFVHPLVNHQYHNYHHPAVPMRGFRGHNIMFQPPVTAASYRVPTNPLRNAVIPAQNGFEMGHRPVGLVPSAGLQVYRPHRGYMNETTIGHQNLHPMGYLQVDDVAILDEVGLVDHHRDMRLDIEDMSYEELLALSERIGNVSTGLSEESISALMKTRIYATPTIINLEEEEASEDQETDSCTICLEKYENKQKIGILQCGHEYHAHCLKRWLKEKNVCPICKSEALSPGKDKDIKTK 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1555g00004 543 MobiDBLite consensus disorder prediction 1 27 - -
Pral1555g00004 543 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 100 533 IPR045191 GO:0061630
Pral1555g00004 543 Pfam Ring finger domain 485 528 IPR001841 -
Pral1555g00004 543 ProSiteProfiles Zinc finger RING-type profile. 487 528 IPR001841 -
Pral1555g00004 543 SMART ring_2 487 527 IPR001841 -
Pral1555g00004 543 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 444 532 IPR013083 -
Pral1555g00004 543 MobiDBLite consensus disorder prediction 1 35 - -
Pral1555g00004 543 SUPERFAMILY RING/U-box 476 532 - -
Pral1555g00004 543 CDD RING-H2_RNF24-like 485 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1555g00004 Pral-Chr1555 10073 13075 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1555g00004 397 532 C3H Transcription Factor Family AT2G15530 45.652 4.12e-33 132