Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1554g00017 ATGTCTGATGAACCTAGTAAGGATCTTTATTACCGGGATCTTTACTTAGGCCATAATAATCAGCAGTCCACAGGTGGATCTGCCATGTTCTGTGAGAAGAACTTGTCTTGCTTTAATATTCCTGTCTCTTCATCATCAGGTTTTGATGATCCTCCGTACATGACCTTCACTGAATGCCTGCAAGGAGGCCTAGACTACAATTCTCTTGCTACTTCCTTTGGCTTGTCTCCTTCCTCCTCCGAGGTTTTCTCTTCTGTTGAAGGCAGTAATATTATTAATCAGAAGCCATCATCAGAAGCTCCTGGAGATTTAGGTGGTGGGAGTGAAACGCCGGTGACCCAGAATTCTTCCGTCTCTAATTCATCTTCTTCTGAAGCCGGAGCTGAAGAAGAAGACTCAGGGAAGAGCAAGAAAGATAGTGATGATCAGGTCAAAGCATCAGAAGAAGAAGGATCTAGCAAGAAAGGGAACAAAGGCAGGAAGAAAGGAGAGAAGAAGCAGAAGGAGCCCAGGTTTGCGTTCATGACCAAGAGCGATGTGGATCACCTTGAAGATGGTTATAGATGGAGAAAATATGGACAGAAAGCAGTCAAGAATAGCCCTTACCCAAGAAGCTACTACAGGTGCACGACGCAGAAGTGCACAGTGAAGAAACGCGTGGAGAGGTCATATCAGGACCCAACCACTGTGATAACAACGTATGAGGGTCAGCACAACCATCCGGTCCCCACATCGCTGAGAGGAAATGCGGCCGCAATGTTCACACCTTCATCTCTCTTAACACCACACACTCCGTCATCACTTGCCGCCGCAGCTGCAGCAGCCGCCGCCTCCCACCATGATTTCTTCCTTCACATGCCCCACCATCACTCGTCAGCTGCCCCTTCCAACGTTTATTATAACAACAACAACAGTAATATTATCCACAGTACCAATGCTTCTTCTTCTTCTCTTCTTCATCAGCAGCAACTTCCTCCTTATGACTACGGCCTCCTCCAGGACATTCTTCCTTCCATGTTCCTCAAACAAGATCATCCCTAG 1041 0.4688 MSDEPSKDLYYRDLYLGHNNQQSTGGSAMFCEKNLSCFNIPVSSSSGFDDPPYMTFTECLQGGLDYNSLATSFGLSPSSSEVFSSVEGSNIINQKPSSEAPGDLGGGSETPVTQNSSVSNSSSSEAGAEEEDSGKSKKDSDDQVKASEEEGSSKKGNKGRKKGEKKQKEPRFAFMTKSDVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSYQDPTTVITTYEGQHNHPVPTSLRGNAAAMFTPSSLLTPHTPSSLAAAAAAAAASHHDFFLHMPHHHSSAAPSNVYYNNNNSNIIHSTNASSSSLLHQQQLPPYDYGLLQDILPSMFLKQDHP 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1554g00017 346 ProSiteProfiles WRKY domain profile. 178 243 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral1554g00017 346 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 105 301 IPR044810 GO:0003700
Pral1554g00017 346 SMART WRKY_cls 183 242 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral1554g00017 346 FunFam WRKY transcription factor 57 169 243 - -
Pral1554g00017 346 Pfam WRKY DNA -binding domain 184 241 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral1554g00017 346 SUPERFAMILY WRKY DNA-binding domain 175 243 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral1554g00017 346 Gene3D WRKY domain 168 244 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral1554g00017 346 MobiDBLite consensus disorder prediction 91 177 - -
Pral1554g00017 346 MobiDBLite consensus disorder prediction 128 157 - -
Pral1554g00017 346 MobiDBLite consensus disorder prediction 108 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1554g00017 Pral-Chr1554 37161 38962 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1554g00017 39 344 WRKY Transcription Factor Family AT4G18170 51.125 8.04e-76 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral1554g00017 WRKY 2.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1554g00017 - - gmx:100787050 311.997