Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1553g00008 ATGACTCAGTGCAATGACTCAGAAAATAGTCACAGCAACATCATCGTGGAGAAACGCGAAGACAGCTTAATTACAACATGCCCTTCCTGTGGACATCATATCAGATGCCACGAACAGGCTGGGATCCATGACTTGCCTGGACTGCCTGCTGGAGTGAAGTTTGATCCAACAGATCAAGAGATTCTTGAACATTTGGAAGCCAAAGTTCGACCTGATATTCATAAGCTTCATCCATTAATTGATGAGTTCATCCCGACTCTTGAAGGCGAGAATGGAATCTGCTATACTCATCCTGAGAAGCTACCAGGAGTAAGCAAAGATGGTCTGGTCCGCCATTTCTTTCACAGGCCATCGAAAGCATACACGACAGGAACAAGGAAAAGGAGGAAGGTACATACTGATGACGTGGACGGCAGCGAGACACGTTGGCACAAGACAGGCAAGACGAGGCCAGTGTATCTGAGCGGGAAGCTAATAGGGTACAAGAAGATTCTGGTGCTTTACACAAACTATGGGAAGCAAAGGAAGCCCGAGAAGACAAACTGGGTGATGCACCAGTACCACCTGGGTTACAACGAAGAGGAGAAAGAAGGAGAGTTAGTGGTGTCCAAGGTTTTCTATCAAACACAACCCAGGCAATGTGGTTCCATGCTCATGAAAGATCAGCCAGTCACTCCTTCAAAACTCAAAGCCCAGGCCATGTACGAGGCTGCCAATAATCATCACAAGGGCAGTAATAATGGGTTTGTTGAGTTCTACGGTTCTTCTTTCTTGTCCTTTGACCAAGGGAACCAACACAGGTCTAGCAATTCTCAAGTGATCTCCCATTTTCCTGTCCAGGATGGTTCTTCTTTCAATATTCCCTGA 867 0.4637 MTQCNDSENSHSNIIVEKREDSLITTCPSCGHHIRCHEQAGIHDLPGLPAGVKFDPTDQEILEHLEAKVRPDIHKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGLVRHFFHRPSKAYTTGTRKRRKVHTDDVDGSETRWHKTGKTRPVYLSGKLIGYKKILVLYTNYGKQRKPEKTNWVMHQYHLGYNEEEKEGELVVSKVFYQTQPRQCGSMLMKDQPVTPSKLKAQAMYEAANNHHKGSNNGFVEFYGSSFLSFDQGNQHRSSNSQVISHFPVQDGSSFNIP 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1553g00008 288 ProSiteProfiles NAC domain profile. 48 208 IPR003441 GO:0003677|GO:0006355
Pral1553g00008 288 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 19 231 IPR044799 GO:0003700
Pral1553g00008 288 Pfam No apical meristem (NAM) protein 49 189 IPR003441 GO:0003677|GO:0006355
Pral1553g00008 288 SUPERFAMILY NAC domain 42 208 IPR036093 GO:0003677|GO:0006355
Pral1553g00008 288 Gene3D NAC domain 57 212 IPR036093 GO:0003677|GO:0006355
Pral1553g00008 288 FunFam NAC domain-containing protein 73 57 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1553g00008 Pral-Chr1553 33946 37452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1553g00008 1 223 NAC Transcription Factor Family AT4G28500 73.222 2.24e-122 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral1553g00008 NAM 3e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1553g00008 - - gmx:100797459 477.633