Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1553g00001 ATGGATTTGCAAAATGGATCTGGGGTAAACGAGTTGTTCCAAGCCCATGCCCACGTATGGAACCAAACCTACAACTTCATCAATTCCATGTGCCTTAAGTGTGCAGTTCAACTGGGCATACCAGATCTCATCCACAATCATCCCCAACCCTTCATGGCTCTCTCTCAACTCACAGCTTCCCTACCAATCAATCCTGCAAAAGCAAACAGTATCAGACAGCTCATGTCCATTCTCACACATTCAGGTTTCTTCCACAAAAAGAAACCTAATGAAGATGGAGAAGAAGAAGAAGAAGAATCCTACGCCATGACTTACGCCGGTAGGCTTCTTGTAAAGGACAACCCCTTGAGTATGACCTCTTCTTTGCTTCTTTCACTTGATCCTATTCAGATGGAGCCTTGGCATCATTTGAGTACTTGGTTCCAGAATGATCACCCTACCGCATATCACACAGCACATGGAATGGCTATTTGGGAGTATGCAAGCCATAATTCAAAGCTCAATAATTTATTTAACAACGCAATGCTGTGTGATTCTCGCCTGGTGTCAAGTGCCATGCTTCACAAGCTGAAGTGGGTGTTCGAGGGGTTAGAGTCGCTGGTTGATGTTGGAGGAGGCACAGGAACTATAGCGAAGGCCATAGCTCAATCCTTCCCAACCATGAAATGCACTGTGCTCGATCTTCCACACGTTGTCGCTGGCTTGAAAGGCACCAACAAGTTGAACTACGTTGGAGGTGACATGTTTGAGGCAATTCCTCAAGCAGATGCAGTTCTACTGAAGTGGGTCCTGCATGATTGGGGTGATGAAGAATGTGTGAGGATACTTAAGAAGTGCAAGGAGGCGATTTCAGGCGATGGGAAGAAGGGTAACAAAGTGATCATCATAGACATGGTGGTGGATCAGGAGAATAAAGATCATGAATCGGTGGAGACACAACTTTTCTTGGATATGCTGATGATGGTGCTTTTTACTGGAAGAGAAAGAAGTGAGAAGGAATGGATCAAGTTAATTTGCTCCGCTGGTTTCACTGATTTCAAGATAAGTCGTGTTCTGGGTTTAAGGTCTATCATTGAAATTTATCCTTAG 1089 0.4454 MDLQNGSGVNELFQAHAHVWNQTYNFINSMCLKCAVQLGIPDLIHNHPQPFMALSQLTASLPINPAKANSIRQLMSILTHSGFFHKKKPNEDGEEEEEESYAMTYAGRLLVKDNPLSMTSSLLLSLDPIQMEPWHHLSTWFQNDHPTAYHTAHGMAIWEYASHNSKLNNLFNNAMLCDSRLVSSAMLHKLKWVFEGLESLVDVGGGTGTIAKAIAQSFPTMKCTVLDLPHVVAGLKGTNKLNYVGGDMFEAIPQADAVLLKWVLHDWGDEECVRILKKCKEAISGDGKKGNKVIIIDMVVDQENKDHESVETQLFLDMLMMVLFTGRERSEKEWIKLICSAGFTDFKISRVLGLRSIIEIYP 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1553g00001 362 Gene3D - 2 110 IPR036388 -
Pral1553g00001 362 Gene3D Vaccinia Virus protein VP39 111 362 IPR029063 -
Pral1553g00001 362 PANTHER O-METHYLTRANSFERASE 14 345 IPR016461 GO:0008168
Pral1553g00001 362 Pfam Dimerisation domain 30 79 IPR012967 GO:0046983
Pral1553g00001 362 SUPERFAMILY "Winged helix" DNA-binding domain 10 115 IPR036390 -
Pral1553g00001 362 CDD AdoMet_MTases 200 288 - -
Pral1553g00001 362 PIRSF O-mtase 2 362 IPR016461 GO:0008168
Pral1553g00001 362 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 362 IPR016461 GO:0008168
Pral1553g00001 362 Pfam O-methyltransferase domain 134 343 IPR001077 GO:0008171
Pral1553g00001 362 FunFam O-methyltransferase ZRP4 112 362 - -
Pral1553g00001 362 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 360 IPR029063 -
Pral1553g00001 362 FunFam Coniferyl alcohol 9-O-methyltransferase 2 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1553g00001 Pral-Chr1553 6376 7597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1553g00001 30 348 Monolignol Biosynthesis Gene Families AT5G54160 32.099 2.00e-50 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1553g00001 - K16040 qsa:O6P43_028866 449.899