Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1552g00001 ATGATGATTTCTTGTGTTGTGTTGCTAATAGCTCCGACTGGTGCTGGAGATGATGATGGAGGGAAGAAGTTGATAATTGGACTTCCTTATTATAAATCAGGTTTCGCCCAGTTTGTGGATGTACAAATCGATCCTACTAATAACAATAATCAGGTCGTCCAGGCTAGCGGCTATTCTATTGCCGTCTTCAATGCTACAATAGCCTACCTTACGCGTTTACATCACGGTATTTCTTTCGAGTTTAGAGCTTTCGTAAACAACAATGGAAGCAGTGCTGGGTATTATGACGCACTTGTCTCCCAAATTTCTGCAGAAAAGTATGACGCTGTGGTGGGAGACGTGACGATTTTGGAAAATCGGTTTAACCATGCAGATTTCACGTTGCCATATACACAATCTAATGTGAAGATGCTTGTGAAAATCCGGCATGATCCACGGTTGAACATGTGGATTTTGTACGACCGTTTAATTGGAGAAAAAATTCAGTGGGGTTTTCTCCTGTGGCTTCCTGTTGTGCAAGCAGTTTTTCCCGAAAGAGAATCACTGGCCAAAAATTGCTCTAGGTTTGTGCTGGTGATGTGGTTGATATTGTGGCTCATTGTGAGGGACTTATTGGTTGATAACTTGATGATCAATAGTTCAAGGGTGAAGAACTACTCCTCCATTAAAGACTATAAGGAAGCCTTAGACAAAGGAAGCCATAATGGTGGTGTCGATGCCATTTTTGATGAAGCTCCCTACTTTAAGGCCTTCCTCAAACAGTATGGCTCCAATTATGCCGTGGTTTCAACTAAGCACCATGCTGCTGGATTTGGTTTTGCATTTCGTAAGGGCTCCAACTTAACCTCGCACTTTTCGAAAGCCATATTAAATATTAGGGAGAGTAATGAAATGGACGGCATTGAGGAGAGATATTTTGGAAGCAGCGATGACGATGGAAACAAAGATCAATCAAATTCATCATCAAATGCGAGTCCCCAGTCTTACTGCTTATAG 996 0.4187 MMISCVVLLIAPTGAGDDDGGKKLIIGLPYYKSGFAQFVDVQIDPTNNNNQVVQASGYSIAVFNATIAYLTRLHHGISFEFRAFVNNNGSSAGYYDALVSQISAEKYDAVVGDVTILENRFNHADFTLPYTQSNVKMLVKIRHDPRLNMWILYDRLIGEKIQWGFLLWLPVVQAVFPERESLAKNCSRFVLVMWLILWLIVRDLLVDNLMINSSRVKNYSSIKDYKEALDKGSHNGGVDAIFDEAPYFKAFLKQYGSNYAVVSTKHHAAGFGFAFRKGSNLTSHFSKAILNIRESNEMDGIEERYFGSSDDDGNKDQSNSSSNASPQSYCL 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1552g00001 331 SUPERFAMILY Periplasmic binding protein-like II 9 308 - -
Pral1552g00001 331 MobiDBLite consensus disorder prediction 312 331 - -
Pral1552g00001 331 SMART GluR_14 23 308 IPR001320 GO:0015276|GO:0016020
Pral1552g00001 331 Gene3D - 214 270 - -
Pral1552g00001 331 Gene3D - 19 160 - -
Pral1552g00001 331 MobiDBLite consensus disorder prediction 303 331 - -
Pral1552g00001 331 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 20 200 IPR015683 -
Pral1552g00001 331 Pfam Bacterial extracellular solute-binding proteins, family 3 95 307 IPR001638 -
Pral1552g00001 331 Gene3D - 271 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1552g00001 Pral-Chr1552 2830 4445 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1552g00001 11 311 Ion Channels AT2G29120 30.245 9.08e-40 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1552g00001 K05387 - pcin:129319703 394.045