Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1547g00001 ATGGGCGTGCTGGAACTGTCCATGTGGATGCAATTTGCTTTGGCTTTTCTTCTAGGCATGGGTAATGAGTCATCTTCCTTATCCATACCTATTGATAATTTCTTGCTCGCTTGTGGTTCTTCTGTGAACATAACCTTTCAGGGTCGCACTTTTTCTCCTGAATCTGTCTATGAGAAGCACAGATTAGAATTGAAAACCCAGAAATCTGTTGTTGTAACCTCTGATTCTGGCTCACCGACTTCAGTCTACCAGTCAGCTAGAATCTTTTGGAGCAATGCTTCATATATATTCAGAATTGTGCGACCAGGCCAGCATTGGATTCGCCTTTACTTCTCCCCTTTGCCCAACTTTCATCAGAACATGTCCTCTGCCTCAATAACAGTCATCACTGATGGAATTGTCCTTCTCAGTGATTTCAGTTTCATCACCTATGGTGGTTCTTACCTTTTCAAGGAGTACGTAACCAATATTACATCTCCTAGTTTGTCTCTCACATTCATCCCTTCCAGAAATTCATTTGTCTTTGTTAATGCCATTGAAGTTGTCTCTGTACCTGAAGATATCTTTGTTAATGTAATCGATATTACATCAGTTTTTATGGAGAATTCTTCAGACCTGGTCCTTGAAACTGTTTACCGTTTGGATGTGGGCAATGAATCTCTCACCACCAGGAACGATGACCTTGGTCGAAACTGGGAAGGTGATGAAAAGTACATGGCCTCCAATAATAGAGCATTAAATGTTTCAGTTGACACTTCCTCTATAAATTTTGCTTCTCAGACTGAACCTACCATAGCACCAATGTGGGTTTATGCTACAGCCAAAGCCATGGCAGATGAAAGAAGTTTAGATTTAACTTGGGTCTTCTCTGTAAATCCAAACCATACCTATTTTGTTCGGGTGCATTTCTGTGATGTCATAAGCAACTCAAAGAGTCTTACAATTTTCAATCTGTTTATAAATGATGTTGTTTATGAAAGAGTAGACCTTTACTCCATATTTCTCAAGTTTTCAGTCCCATTTTACATGGATTTTGTTGTCTACACCAAAAAGCGTGATTTGACACTAAGTGTTGCTCCAGATAGGATGACGAATAGCAGGAATGCAACCATAAGTGGGCTGGAGATAATGGAGATCATCAATGAAGTTAGAATGCTGGATGGAGTGGCGCCCTCTGAGAGTATTCTTCCCAATTCATCCTCAAGAATTGTGAAAGTATCAAATATAACTGTGCCTGTCATTGGCGTTGCAGCTTTCCTAGTTCTCACTGCAATAAAATTATGTTACATAATAGCTCACAGGTCCAGGGCAAGCTCCAGAACTACTCCCTTATCATGCAGGCTGTTCACCTTACATGAAATCAGTGCAACAAACAGCTTTGACGAGTCTCTGCTTCTTGGAGAAGGTGGTTTTGGCAAGGTCTATGAAGGAACGATGGTTAATGGGATAAAAGTAGCCATCAAAGTAGCCAATCATGAATCAAGGCAGGGTCTTCATGAATTTCAGAATGAGATTAAATTGCTATCCAAGCTTTCTCATTCGAACCTTATCTCTCTAATTGGTTGTTGTAATGAAGACTCACGGATGATTCTTGTCTACGAGTTCTTAGCTAATGGATCTTTAAGCGGCTACCTCTATGGAGCTGGCTTTATTCCTCTTTCATGGAAGCAGCGGCTAGAAATATGCATTGGGACAGCAAAGGGTCTTCATTTCCTTCACACAAGAGTTCCTCGAAGCATAATCCATCGTGATGTTAAGACAACGAATATTCTGTTGGACAAGAATTTAGTTCCAAAAGTTGCTGATTTTGGAATCTCAAGAAAAGGTCCACCTCTTGATAAGAGTCATGTAACAACCTTTGTAAAGGGCAGCTTTGGTTATATTGATCCTGAGTATTTCAGAACAAAATATCTCACTGAGAAATCAGATGTTTTCTCATTTGGGATGGTTCTGATGGAAGTTATCTGTGGTAAGCCTGCTTTGGACAATACTCGTCCAACAGAGCATCTTAATCTGGCAAGATGGGCATCAAGCTGCCAAGAAATGGGCACCTTTCATGAGATTATAGACCCATATTTGAACGGAAAAGTGAACTTAGATTCTCTAAACAAAGTATGTGAATTGGCTTGGAAGTGCTTGGAGGAGAGACGCATAAATAGACCACCAATAGGGTATGTACTGTGTGAGCTTGAAGATGCTCTCCACATTGAGTTGGCTTCACCAATTCAGCAAGTTTCTGTGGATTGTGCCATCGAAAATGGAATGAAGGATGAAAAGTGCATGACTTGGCTCGGAAGTGCTCAGGGAAGAGTCGCATAA 2319 0.4066 MGVLELSMWMQFALAFLLGMGNESSSLSIPIDNFLLACGSSVNITFQGRTFSPESVYEKHRLELKTQKSVVVTSDSGSPTSVYQSARIFWSNASYIFRIVRPGQHWIRLYFSPLPNFHQNMSSASITVITDGIVLLSDFSFITYGGSYLFKEYVTNITSPSLSLTFIPSRNSFVFVNAIEVVSVPEDIFVNVIDITSVFMENSSDLVLETVYRLDVGNESLTTRNDDLGRNWEGDEKYMASNNRALNVSVDTSSINFASQTEPTIAPMWVYATAKAMADERSLDLTWVFSVNPNHTYFVRVHFCDVISNSKSLTIFNLFINDVVYERVDLYSIFLKFSVPFYMDFVVYTKKRDLTLSVAPDRMTNSRNATISGLEIMEIINEVRMLDGVAPSESILPNSSSRIVKVSNITVPVIGVAAFLVLTAIKLCYIIAHRSRASSRTTPLSCRLFTLHEISATNSFDESLLLGEGGFGKVYEGTMVNGIKVAIKVANHESRQGLHEFQNEIKLLSKLSHSNLISLIGCCNEDSRMILVYEFLANGSLSGYLYGAGFIPLSWKQRLEICIGTAKGLHFLHTRVPRSIIHRDVKTTNILLDKNLVPKVADFGISRKGPPLDKSHVTTFVKGSFGYIDPEYFRTKYLTEKSDVFSFGMVLMEVICGKPALDNTRPTEHLNLARWASSCQEMGTFHEIIDPYLNGKVNLDSLNKVCELAWKCLEERRINRPPIGYVLCELEDALHIELASPIQQVSVDCAIENGMKDEKCMTWLGSAQGRVA 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1547g00001 772 SUPERFAMILY Protein kinase-like (PK-like) 453 731 IPR011009 -
Pral1547g00001 772 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 277 743 - -
Pral1547g00001 772 ProSitePatterns Protein kinases ATP-binding region signature. 466 488 IPR017441 GO:0005524
Pral1547g00001 772 SMART serkin_6 460 738 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1547g00001 772 Pfam Protein tyrosine and serine/threonine kinase 466 672 IPR001245 GO:0004672|GO:0006468
Pral1547g00001 772 Gene3D Phosphorylase Kinase; domain 1 428 535 - -
Pral1547g00001 772 ProSiteProfiles Protein kinase domain profile. 460 738 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1547g00001 772 CDD STKc_IRAK 466 731 - -
Pral1547g00001 772 Gene3D - 206 380 - -
Pral1547g00001 772 Gene3D - 34 185 - -
Pral1547g00001 772 ProSitePatterns Serine/Threonine protein kinases active-site signature. 580 592 IPR008271 GO:0004672|GO:0006468
Pral1547g00001 772 FunFam Putative receptor-like protein kinase 33 185 - -
Pral1547g00001 772 Gene3D Transferase(Phosphotransferase) domain 1 536 747 - -
Pral1547g00001 772 Pfam Malectin-like domain 60 378 IPR024788 -
Pral1547g00001 772 FunFam receptor-like protein kinase FERONIA 429 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1547g00001 Pral-Chr1547 4420 6738 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1547g00001 29 739 Receptor kinase-like Gene Family AT5G59700 42.133 0.0 537
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pral1547g00001 Malectin_like 1.5e-26 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1547g00001 - - pcin:129313301 1088.17