Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1544g00001 ATGGCGTCTTATCAAGAAGCAAGGCTATTGGAGAACGGAAACCTCAAGGAACCGACCGGCAAGGAGATCATGAGGCACGGCCGTTCGGCTCGCAAAATGTCCTCTTCCTCCTTGCGCAAGAAATCTGACCTCAGGCTTGTTTCCAAAGTTCGCTGCGCCTTGCTCCGAAATTTGTTGGCTAATCTGCAAGAGGTCATTCTGGGGACTAAGCTTTCCGTGCTTTTCCCTGCGATTCCTCTGGCCATTGCTGCTGATTGCTATGGATTCGGACGACCGTGGGTTTTTGCGTTGAGCTTACTAGGACTCACACCACTCGCTGAACGAATCAGCTTCCTGACAGAACAAGTTGCTTATTACACAGGCCCCACAGTGGGAGGGCTTCTGAACGCGACATGTGGAAATGCGACGGAGCTCATAATAGCAATATTTGCACTCAACAACAATAAAATAGCTGTGGTCAAGTATTCTCTCTTAGGTTCCATTCTTTCAAACCTGCTCTTAGTCCTTGGAACTTCTCTTTTCTGTGGCGGCATAGCAAACATTTCACAGCCACAAAAATATGACAGAAGACAAGCAGATGTGAATTCACTCATGCTTCTGCTTGCATTATTGTGCCACATGCTTCCAATGCTATTCAGATATGCTACTGCCTCAACTGCTCTCGCTGCAGACCCATCTCTCCAATTATCAAGAGCTGCAAGTATTGTCATGTTGATCGCATATTTCGTTTACCTTGTCTTTCAACTCTGGACTCATCGCCAATTATTTGAAGCCCAGGCTGAAGACGATGATAGTGACAGCGTTTCAGAAGAAGCGGCAGTGATTGGATTCTGGAGTGGGTTTGCATGGCTGGCAGGGATGACAGTGTTCATAGCATTGTTGTCTGAGTATGTGGTGGAGACAATAGAGGATGCATCAGACTCGTGGGGTCTGTCTGTCAGCTTCCTCAGCATAATTTTACTACCAATAGTAGGAAATGCAGCTGAACATGCAGGAGCAATCATTTTTGCTTTTAAGAACAAGCTGGACATCTCTTTGGGTGTTGCTTTGGGTTCTGCAACTCAAATTAGCTTGTTTGTGGTTCCCCTCTGTGTGATTATTTCTTGGATACTGGGCAACAAAATGGATCTTAACTTTAACGTCGTTGAAACGGGTTCACTTGCTTTGGCCATTATAGCCACTGCCTTCACTTTACAGGACGGAACGTCTCATTACATGAAAGGTTTTATTCTCCTGCTCTGCTACGTTGTTATTGGGGCATGCTTTTTTCTACAGAGAACACCATTCAACCAAGTTCATCTCGGCAACATGGTGCCTAATTCAGCAACCGACACCGTTTTCAAAGCTTAA 1350 0.457 MASYQEARLLENGNLKEPTGKEIMRHGRSARKMSSSSLRKKSDLRLVSKVRCALLRNLLANLQEVILGTKLSVLFPAIPLAIAADCYGFGRPWVFALSLLGLTPLAERISFLTEQVAYYTGPTVGGLLNATCGNATELIIAIFALNNNKIAVVKYSLLGSILSNLLLVLGTSLFCGGIANISQPQKYDRRQADVNSLMLLLALLCHMLPMLFRYATASTALAADPSLQLSRAASIVMLIAYFVYLVFQLWTHRQLFEAQAEDDDSDSVSEEAAVIGFWSGFAWLAGMTVFIALLSEYVVETIEDASDSWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQISLFVVPLCVIISWILGNKMDLNFNVVETGSLALAIIATAFTLQDGTSHYMKGFILLLCYVVIGACFFLQRTPFNQVHLGNMVPNSATDTVFKA 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1544g00001 449 Gene3D - 122 261 IPR044880 -
Pral1544g00001 449 Gene3D - 267 422 IPR044880 -
Pral1544g00001 449 FunFam Vacuolar cation/proton exchanger 122 266 - -
Pral1544g00001 449 FunFam Vacuolar cation/proton exchanger 268 424 - -
Pral1544g00001 449 NCBIfam calcium/proton exchanger 57 423 - -
Pral1544g00001 449 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 25 428 IPR004713 GO:0006812|GO:0008324|GO:0016020
Pral1544g00001 449 NCBIfam calcium/proton exchanger 76 423 IPR004798 GO:0006816|GO:0015369
Pral1544g00001 449 Pfam Sodium/calcium exchanger protein 280 418 IPR004837 GO:0016020|GO:0055085
Pral1544g00001 449 Pfam Sodium/calcium exchanger protein 93 250 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1544g00001 Pral-Chr1544 11596 16248 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1544g00001 11 432 Antiporters AT2G38170 69.626 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1544g00001 K07300 - zju:107405517 643.269