Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1543g00003 ATGAGCGACAACACGTCCCCCGGCGGCGGTTCTTCCAGCGGCTCTTCATCGGCGGAGGGCAGGGACAAGAAGAGGGAGAAGGCTAAAGTTAGTCGCACTTCAATGATACTATGGCATTCGCACCAAAACGATGCCACCGCTGTTCGGAAGCTCCTGGAGGAAGATCCGTCGCTTGTGATGGCCAGAGATTACGATAATCGAACTCCACTTCATGTGGCTTCCCTCCATGGTTGGATTGACGTTGCTAAGTGCTTGATTGAATTTGGTGCCGATGTTAACTCTCAGGATCGTTGGAGAAACACTCCTCTAGCTGATGCAGAAGGAGCTAAAAAGTATAGCATGATGGAGCTTTTAAAATCATATGGAGGCTTGTCTTATGGCCAAAGTGGAAGCCACTCTGAACAGAAGCCCGTTGCACCCCCATTGTCTAACAAGTGTGATTGGGAAGTCGACCCTACTGAGCTGGACTTCTCACATTCAGCTCGTATTGGAAAGGGATCTTTTGGTGAGATTTTAAAAGCCCATTGGCGTGGGACGCCAGTTGCTGTCAAACGCATTCTTCCATCTCTTTCAGATGATAAATTAGTGGTCCAGGACTTCAGGCATGAGGTTAATTTGTTAGTGAAGCTTCGACACCCAAACGTAGTCCAGTTTCTTGGAGCTGTTACCGAGAAGAAACCTCTTATGTTAATCACTGAATATCTTAGAGGGGGCGATCTTCATCAGCATCTTAAGGAAAAAGGTTCAATTAGTCCATCGACAGCTGTCAACTTTGCGTTAGATATTGCCAGAGGGATGGCCTATCTTCACAACGAACCAAATGTTATAATTCATCGGGACCTTAAGCCAAGGAATGTTCTTTTAGTCAATTCTAGTGCAGAGCATTTAAAAGTCGGAGATTTTGGACTGAGCAAGCTTATCAAGGTCCAGAATTCTCATGACGTTTACAAGATGACTGGTGAAACAGGAAGCTACCGGTATATGGCTCCTGAAGTATTCAAACACAAGAAATACGATAAGAAGGTTGATGTCTTCTCCTTTGCAATGATACTATACGAGATGCTGGAAGGGGAACCACCTTTTGCCAATTATGAGCCTTATGACGGAGCCAAACATGTGGCAGAAGGACGCAGGCCAACTATGCGAGCAAAGGGTTATATCCCTGAATTGCGAGAGTTAACAGAACAGTGCTGGGCAGCTGATTACCATCAAAGACCATCCTTCTTGGAGATCCTTAAACGACTTGAGAAGATCAAAGAAAACAATCTACCTTCGGAATATCCCTGGAAATTGTTCTCTTCCTAA 1305 0.4536 MSDNTSPGGGSSSGSSSAEGRDKKREKAKVSRTSMILWHSHQNDATAVRKLLEEDPSLVMARDYDNRTPLHVASLHGWIDVAKCLIEFGADVNSQDRWRNTPLADAEGAKKYSMMELLKSYGGLSYGQSGSHSEQKPVAPPLSNKCDWEVDPTELDFSHSARIGKGSFGEILKAHWRGTPVAVKRILPSLSDDKLVVQDFRHEVNLLVKLRHPNVVQFLGAVTEKKPLMLITEYLRGGDLHQHLKEKGSISPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSAEHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHKKYDKKVDVFSFAMILYEMLEGEPPFANYEPYDGAKHVAEGRRPTMRAKGYIPELRELTEQCWAADYHQRPSFLEILKRLEKIKENNLPSEYPWKLFSS 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1543g00003 434 Pfam Ankyrin repeats (many copies) 51 103 IPR002110 GO:0005515
Pral1543g00003 434 Gene3D - 10 129 IPR036770 -
Pral1543g00003 434 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 77 420 - -
Pral1543g00003 434 Gene3D Transferase(Phosphotransferase) domain 1 237 429 - -
Pral1543g00003 434 SUPERFAMILY Protein kinase-like (PK-like) 155 426 IPR011009 -
Pral1543g00003 434 SUPERFAMILY Ankyrin repeat 34 122 IPR036770 -
Pral1543g00003 434 MobiDBLite consensus disorder prediction 18 32 - -
Pral1543g00003 434 ProSiteProfiles Ankyrin repeat profile. 65 97 IPR002110 GO:0005515
Pral1543g00003 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 276 288 IPR008271 GO:0004672|GO:0006468
Pral1543g00003 434 SMART serkin_6 157 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1543g00003 434 FunFam Integrin-linked protein kinase family 236 431 - -
Pral1543g00003 434 ProSiteProfiles Protein kinase domain profile. 157 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1543g00003 434 CDD STKc_MAP3K-like 163 415 - -
Pral1543g00003 434 ProSiteProfiles Ankyrin repeat region circular profile. 65 97 - -
Pral1543g00003 434 FunFam serine/threonine-protein kinase STY46-like 150 236 - -
Pral1543g00003 434 PIRSF ILK 2 434 - -
Pral1543g00003 434 MobiDBLite consensus disorder prediction 1 17 - -
Pral1543g00003 434 MobiDBLite consensus disorder prediction 1 32 - -
Pral1543g00003 434 Pfam Protein tyrosine and serine/threonine kinase 160 415 IPR001245 GO:0004672|GO:0006468
Pral1543g00003 434 Gene3D Phosphorylase Kinase; domain 1 149 236 - -
Pral1543g00003 434 SMART ANK_2a 65 94 IPR002110 GO:0005515
Pral1543g00003 434 ProSitePatterns Protein kinases ATP-binding region signature. 163 184 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1543g00003 Pral-Chr1543 15466 21431 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1543g00003 2 434 MAP Kinase Kinase Kinase AT1G14000 79.405 0.0 716
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Pral1543g00003 PK_Tyr_Ser-Thr 5.6e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1543g00003 - - qsa:O6P43_025503 736.873