Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1542g00006 ATGCAGATGAAACCGATTCGTACGTTCACAGAAGTAGCAGCCCCAATCACGCTTTCCTCTTTCCTTCCTTCCTCATCTTCTTCTTCCTTTCAATTCAAACTCATCATCAGAGGACCAAAAGGTGCAATACAAGAGATTGATGAAGAAGAAGAAGAAGCAGAAGAAGACGATGATGATAACGAAGAAGATGAAGAAGACGACGACTTGCTGCAGCTGAAATTGGGGTCAGGATCTGCTACAACCTTATGCAGGAAAAGAGTGGGTAATAATAATGGTGAATCAAACCCGGTAGTTCCAAGATCTGGCTCACTAGGGTTAGGGTTAGGGTTAAAATTATGGCCCAACATGGAGCAGGAAAGTTCAGAAATGGCAGGTGTGGAGGAAGTAGCGAGAAGATTTATTGGGAGGTTACCATCATGGCAAATGGATCCTCAGGATTGGTATAAACCCAGTCCACCAGCTCATAATTCTCATCATTTCTCCCACACAAATCCCCACCACTCTGGTTTGTGGTTTACGCTACACTCTTCTACCAACCAAGGAGAAGCTTTACCTCAGGTGCCAAAGGCGTACATTAGAGTGAAGAACGAAAACATGACGATCTTCATGGTTAAGAAGTATCTGGTTACAAAACTTGGTCTCTTCAACGAAAATGAGGTTGAGATTTTATGCATGGGACAGAGATTGTTGAATGTTCAAAGCTTGAAGGTGGTGAGGGATGCCATTTGGATTCCTGCACTTGTTGACTCTTTAAACGCAGCATCATCTATATCATCATCACTAGCAGATTCATCATGTGGCATGTCTGCCCCAAATTTAATGCCATTACTTTATCAAAAATATATTATTTCAAATAACTCAAATCATTTGTAG 873 0.417 MQMKPIRTFTEVAAPITLSSFLPSSSSSSFQFKLIIRGPKGAIQEIDEEEEEAEEDDDDNEEDEEDDDLLQLKLGSGSATTLCRKRVGNNNGESNPVVPRSGSLGLGLGLKLWPNMEQESSEMAGVEEVARRFIGRLPSWQMDPQDWYKPSPPAHNSHHFSHTNPHHSGLWFTLHSSTNQGEALPQVPKAYIRVKNENMTIFMVKKYLVTKLGLFNENEVEILCMGQRLLNVQSLKVVRDAIWIPALVDSLNAASSISSSLADSSCGMSAPNLMPLLYQKYIISNNSNHL 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1542g00006 290 PANTHER RING FINGER PROTEIN 140 279 IPR044171 GO:0007275
Pral1542g00006 290 MobiDBLite consensus disorder prediction 47 69 - -
Pral1542g00006 290 Coils Coil 43 66 - -
Pral1542g00006 290 Gene3D - 151 245 - -
Pral1542g00006 290 MobiDBLite consensus disorder prediction 47 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1542g00006 Pral-Chr1542 32517 37065 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1542g00006 184 222 C3H Transcription Factor Family AT3G23060 53.846 4.50e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1542g00006 - - cave:132185804 161.77