Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1542g00005 ATGCAGATGAAACCGATTCGTACGTTCACAGAAGTAGCAGCCCCAATCACGCTTTCCTCTTTCCTTCCTTCCTCATCTTCTTCTTCCTTTCAATTCAAACTCATCATCAGAGGACCAAAAGGTGCAATACAAGAGATTGATGAAGAAGAAGAAGAAGCAGAAGAAGACGATGATGATAACGAAGAAGATGAAGAAGACGACGACTTGCTGCAGCTGAAATTGGGGTCAGGATCTGCTACAACCTTATGCAGGAAAAGAGTGGGTAATAATAATGGTGAATCAAACCCGGTAGTTCCAAGATCTGGCTCACTAGGGTTAGGGTTAGGGTTAAAATTATGGCCCAACATGGAGCAGGAAAGTTCAGAAATGGCAGGTGTGGAGGAAGTAGCGAGAAGATTTATTGGGAGGTTACCATCATGGCAAATGGATCCTCAGGATTGGTATAAACCCAGTCCACCAGCTCATAATTCTCATCATTTCTCCCACACAAATCCCCACCACTCTGGTTTGTGGTTTACGCTACACTCTTCTACCAACCAAAGAGGAGAAGCTTTACCTCAGGTGCCAAAGGCGTACATTAGAGTGAAGAACGAAAACATGACGATCTTCATGGTTAAGAAGTATCTGGTTACAAAACTTGGTCTCTTCAACGAAAATGAGGTTGAGATTTTATGCATGGGACAGAGATTGTTGAATGTTCAAAGCTTGAAGGTGGTGAGGGATGCCATTTGGATTCCTGCACTTGTTGACTCTTTAAACGCAGCATCATCTATATCATCATCACTAGCAGATTCATCATGTGGCATGTCTGCCCCAAATTTAATGCCATTACTTTATCAAAAATATATTATTTCAAATAACTCAAATCATTTGTAG 876 0.4167 MQMKPIRTFTEVAAPITLSSFLPSSSSSSFQFKLIIRGPKGAIQEIDEEEEEAEEDDDDNEEDEEDDDLLQLKLGSGSATTLCRKRVGNNNGESNPVVPRSGSLGLGLGLKLWPNMEQESSEMAGVEEVARRFIGRLPSWQMDPQDWYKPSPPAHNSHHFSHTNPHHSGLWFTLHSSTNQRGEALPQVPKAYIRVKNENMTIFMVKKYLVTKLGLFNENEVEILCMGQRLLNVQSLKVVRDAIWIPALVDSLNAASSISSSLADSSCGMSAPNLMPLLYQKYIISNNSNHL 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1542g00005 291 MobiDBLite consensus disorder prediction 45 69 - -
Pral1542g00005 291 PANTHER RING FINGER PROTEIN 140 280 IPR044171 GO:0007275
Pral1542g00005 291 Coils Coil 43 66 - -
Pral1542g00005 291 Gene3D - 152 246 - -
Pral1542g00005 291 MobiDBLite consensus disorder prediction 42 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1542g00005 Pral-Chr1542 32517 37065 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1542g00005 185 223 C3H Transcription Factor Family AT3G23060 53.846 4.49e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1542g00005 - - cave:132185804 165.622