Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1542g00004 ATGGCCTCTTCTTCTCGCTCTATCAACCACAACCAATTCCTCAAATACATCGATGAAGAAAGAGGACCAAAAGGTGCAATACAAGAGATTGATGAAGAAGAAGAAGAAGCAGAAGAAGACGATGATGATAACGAAGAAGATGAAGAAGACGACGACTTGCTGCAGCTGAAATTGGGGTCAGGATCTGCTACAACCTTATGCAGGAAAAGAGTGGGTAATAATAATGGTGAATCAAACCCGGTAGTTCCAAGATCTGGCTCACTAGGGTTAGGGTTAGGGTTAAAATTATGGCCCAACATGGAGCAGGAAAGTTCAGAAATGGCAGGTGTGGAGGAAGTAGCGAGAAGATTTATTGGGAGGTTACCATCATGGCAAATGGATCCTCAGGATTGGTATAAACCCAGTCCACCAGCTCATAATTCTCATCATTTCTCCCACACAAATCCCCACCACTCTGGTTTGTGGTTTACGCTACACTCTTCTACCAACCAAAGAGGAGAAGCTTTACCTCAGGTGCCAAAGGCGTACATTAGAGTGAAGAACGAAAACATGACGATCTTCATGGTTAAGAAGTATCTGGTTACAAAACTTGGTCTCTTCAACGAAAATGAGGTTGAGATTTTATGCATGGGACAGAGATTGTTGAATGTTCAAAGCTTGAAGGTGGTGAGGGATGCCATTTGGATTCCTGCACTTGTTGACTCTTTAAACGCAGCATCATCTATATCATCATCACTAGCAGATTCATCATGTGGCATGTCTGCCCCAAATTTAATGCCATTACTTTATCAAAAATATATTATTTCAAATAACTCAAATCATTTGTAG 828 0.4143 MASSSRSINHNQFLKYIDEERGPKGAIQEIDEEEEEAEEDDDDNEEDEEDDDLLQLKLGSGSATTLCRKRVGNNNGESNPVVPRSGSLGLGLGLKLWPNMEQESSEMAGVEEVARRFIGRLPSWQMDPQDWYKPSPPAHNSHHFSHTNPHHSGLWFTLHSSTNQRGEALPQVPKAYIRVKNENMTIFMVKKYLVTKLGLFNENEVEILCMGQRLLNVQSLKVVRDAIWIPALVDSLNAASSISSSLADSSCGMSAPNLMPLLYQKYIISNNSNHL 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1542g00004 275 Gene3D - 136 230 - -
Pral1542g00004 275 MobiDBLite consensus disorder prediction 29 53 - -
Pral1542g00004 275 PANTHER RING FINGER PROTEIN 132 264 IPR044171 GO:0007275
Pral1542g00004 275 MobiDBLite consensus disorder prediction 1 59 - -
Pral1542g00004 275 Coils Coil 27 50 - -
Pral1542g00004 275 MobiDBLite consensus disorder prediction 13 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1542g00004 Pral-Chr1542 32517 37065 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1542g00004 169 207 C3H Transcription Factor Family AT3G23060 53.846 3.90e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1542g00004 - - cave:132185804 165.622