Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1542g00002 ATGTCAGGTTTTAGAGTAGGTGGCAAGGTGGTGGATAGAGTTGATTTATTGAGGAAGAGGCCTTTGCCATGGCGCTTGGATGTTTGGCCTTTCGTTATTATATATGCTCTGTGGCCAACAACAATTCTTCCCAGCCTAGACTTTGTGGATGCTGCCATTGTATTGGGTGGCCTTGTAGCACTTCACATTCTGTTCTGGTTGTTTACGGTTTGGTCGGTTGATTTCAAATGTTTTGCCCATTACAGCAAGGCTAAAAATATTCACGATGCAGATGCTTGCAAAATAACACCAGCTCAGTTCTCAGGTTCTAAAGAAGTTGTTCCGCTTAATTTTCGGAAAACAGTGGATTCAGAAGAGATTTACTTCGACTTCAGGAAACAACGTTTTGTCTATTCAGAGGAGAATGGAACGTTTTGCAAGCTTTCTTACCCCACCAAGGAAACATTTGGATATTATCTCAGAAGTACTGGCCATGGCACTGAAGCTAAAGTTCTTGCTGCTGCTGAGAAATGGGGGCGCAATGTATTTGATTATCCTCAGCCTACATTTCAGAAGTTGTTGAAAGAGAACTGCATGGAGCCTTTTTTTGTATTTCAGGTTTTCTGTGTGGGTCTCTGGTGCTTGGATGAATATTGGTATTACAGTTTGTTTACTCTAGGCATGCTGTTTATGTTTGAGTCTACTATGGCAAAAAGCCGGCTGAAGACTTTAACTGAGTTGAGACGTGTTAGTGTTGATAGTCAGACCTTAATGGTACATCGCTGTGGCAAGTGGGTAAAACTCTCTGGCACTGATCTCTTGCCTGGGGATGTTGTATCTATTGGACGCTCTTCAGGCCAGAATGGAGAAGAGAAGTCTGTGCCTGCAGACATGCTTATATTGGCTGGAAGTGCTATTGCAAATGAAGCAATTCTCACAGGCGAGTCTACTCCTCAGTGGAAGGTTTCAATTGCTGGTAAAGGCATCGAGGAGAAGTTGTCGGCTAGGCGAGATAAAAGTAATGTCTTATTTGGTGGGACTAAAATTTTGCAGCACACCCCAGACAAGACTTTTCCACTGAAAACGCCTGATGGTGGCTGCTTGGCTGTTGTTCTAAGAACGGGATTTGAAACTAGTCAAGGAAAGCTGATGCGGACAATCTTATTCTCTACTGAAAGGGTGACTGCCAATAGCTGGGAAAGTGGGCTGTTCATTTTGTTCTTGGTTGTGTTTGCTTTAATAGCCGCTGGTTATGTACTTGTTAAGGGGCTAGAGGATCCCACGAGGAGCAAGTATAAGCTTATACTAAGCTGTTCACTTATCATTACTTCTGTGATACCTCCGGAGTTACCCATGGAATTGTCAATAGCAGTTAATACTTCCCTAATTGCCCTGGCTCGGCGTGGAATATTTTGTACAGAACCTTTCAGAATACCATTTGCTGGCAAGGTTGACATATGTTGTTTTGACAAGACTGGAACACTTACTTCTGATGACATGGAGTTCTCCGGAGTTGTTGGGGTGGCAGGGTCTACTGAATTAGAATCTGATGTGAATAAAGTGCCTGCTCGTACTGTAGAAATTCTGGCTTCTTGTCATGCGTTGGTGTTTGTTGATAATAAGCTGGTTGGCGATCCTCTTGAGAAGGCAGCACTCAAGGGAATTGATTGGAGTTATAAATCTGATGAGAAGGCTGTTCCAAAAAAGGGTAATGGCAATCCTGTCCAAATTGTTCAGCGACACCATTTTGCATCTCACTTAAAAAGAATGGCAGTTGTTGTTCGCATTCAAGAGGAGTTTTTGGCCTTTGTGAAGGGTGCCCCAGAAATTATTCAAGATAGGCTCACCGATATACCACCGTCGTATGTTGAGACCTACAAAAAATATACACGTCAGGGTTCTCGTGTTCTTGCCCTTGCTTATAAGTCTCTTCCTGACATGACAGTCAGTGAAGCTAGAGGCTTGGATAGGGATATAGTGGAGAGTGGTCTTACTTTTGCAGGATTTGTGGTATTTAATTGTCCTATTAGATCGGATTCAGCCTCAATTTTATCTGAATTGAAAGGATCGTCACATGACCTGGTTATGATTACTGGTGATCAAGCTTTGACAGCTTGCCATGTTGCTAGTCAAGTGCATATAATATCAAAACCGACATTGATTCTTGGTCCAGCAAGTCATAGTGAAGGGTACAACTGGATGTCTCCCGATGAGTCTGAAATAGTCCCCTACAGTGTGAAGGAGGTTGAATCTTTGTCAGAGACTCATGATCTCTGCATTGGAGGTGATTGCATTGAGATGTTGCAACAAACTTCTGCTAGTTTGCTGGTCATTCCATACGTGAAGGTGTTTGCTAGAGTGGCTCCTGAACAGAAAGAACTCATAATGACCACTTTCAAAAAAGTAGGAAGGATAACGTTGATGTGTGGAGATGGAACAAATGATGTTGGAGCTTTAAAGCAGGCCCATGTAGGGGTTGCTCTTCTGAATGCAATACCTCCAAAAAGTGGAGGCTCCTCTTCGGACTTGTCCAAGGAAGAAGGTACAAAATCTAACAAGCCAAAGAAATCTAAGTCTGCACTTGATTCATCTGGAAAACCTATTGGCTCTAGCGGAGAAGGCACTTCAAAAGCCAAGGGTGCTTCACGATCAGATTCCATTAGCCACTCAAGTAACCGTCATGTGACAGCTGCAGAAATGCAAAAACAAAAGCTTAGGAAAATGTTGGATGAGCTCAATGAGGATGGAGATGGTCGCAGTGCTCCTGTAGTAAAGCTTGGTGATGCCTCAATGGCATCACCTTTCACTGCAAAGCATGCATCTGTTGCTCCCACCACTGACATAATTCGTCAAGGTCGCAGTACTCTTGTGACTACCCTCCAGATGTTCAAAATTCTTGGCCTCAACTGCCTTGCTACTGCATATGTGTTAAGTGTCATGTACCTGGATGGTGTCAAGCTTGGTGATGTGCAAGCCACAATCAGTGGAGTGTTTACTGCTGCCTTCTTCCTTTTCATCTCACATGCCCGCCCTCTTCCTACACTTTCAGCTGAACGTCCTCACCCCAATATCTTTTGTGCTTATGTCCTTCTTTCGCTCCTAGGACAATTTGCAATTCACCTGTTTTTTCTGATTTCCTCTGTTAAAGAGGCCGAGAAACACATGCCTGAGGAATGCATTGAAGTAGATTCTGATTTTCATCCCAACCTAGTGAATACTGTTTCCTACATGGTGAGCATGATGCTTCAGGTGGCTACTTTTGCTGTGAACTATATGGGTCATCCTTTCAACCAGAGCATCTCTGAAAACAAACCATTCCGATATGCCCTCTTTGCTGCTGTTGTCTTCTTCACAGTGATCACATCGGATCTATTCAGAGACTTGAATGACTGGTTGAAGCTGGTGCCACTGCCAGAGGGATTAAGGGATAAACTGTTGATTTGGGCTGCTCTTATGTTTTTGGCCTGCTATTCATGGGAGAGACTATTACGGTGGGCTTTCCCTGGTAAAATTCCAGCTTGGAAGAAACGCCAACGTCTTGCTGCATCCGGCTTTGAAAATAAGAAACGCGTCTGA 3555 0.4363 MSGFRVGGKVVDRVDLLRKRPLPWRLDVWPFVIIYALWPTTILPSLDFVDAAIVLGGLVALHILFWLFTVWSVDFKCFAHYSKAKNIHDADACKITPAQFSGSKEVVPLNFRKTVDSEEIYFDFRKQRFVYSEENGTFCKLSYPTKETFGYYLRSTGHGTEAKVLAAAEKWGRNVFDYPQPTFQKLLKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLGMLFMFESTMAKSRLKTLTELRRVSVDSQTLMVHRCGKWVKLSGTDLLPGDVVSIGRSSGQNGEEKSVPADMLILAGSAIANEAILTGESTPQWKVSIAGKGIEEKLSARRDKSNVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFALIAAGYVLVKGLEDPTRSKYKLILSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDICCFDKTGTLTSDDMEFSGVVGVAGSTELESDVNKVPARTVEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAVPKKGNGNPVQIVQRHHFASHLKRMAVVVRIQEEFLAFVKGAPEIIQDRLTDIPPSYVETYKKYTRQGSRVLALAYKSLPDMTVSEARGLDRDIVESGLTFAGFVVFNCPIRSDSASILSELKGSSHDLVMITGDQALTACHVASQVHIISKPTLILGPASHSEGYNWMSPDESEIVPYSVKEVESLSETHDLCIGGDCIEMLQQTSASLLVIPYVKVFARVAPEQKELIMTTFKKVGRITLMCGDGTNDVGALKQAHVGVALLNAIPPKSGGSSSDLSKEEGTKSNKPKKSKSALDSSGKPIGSSGEGTSKAKGASRSDSISHSSNRHVTAAEMQKQKLRKMLDELNEDGDGRSAPVVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLPTLSAERPHPNIFCAYVLLSLLGQFAIHLFFLISSVKEAEKHMPEECIEVDSDFHPNLVNTVSYMVSMMLQVATFAVNYMGHPFNQSISENKPFRYALFAAVVFFTVITSDLFRDLNDWLKLVPLPEGLRDKLLIWAALMFLACYSWERLLRWAFPGKIPAWKKRQRLAASGFENKKRV 1184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1542g00002 1184 SFLD p-type atpase 462 947 IPR044492 -
Pral1542g00002 1184 NCBIfam HAD-IC family P-type ATPase 396 502 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral1542g00002 1184 NCBIfam HAD-IC family P-type ATPase 774 821 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral1542g00002 1184 PANTHER CATION-TRANSPORTING ATPASE-RELATED 12 1160 IPR006544 GO:0006812|GO:0016020|GO:0019829|GO:0140358
Pral1542g00002 1184 FunFam Cation-transporting ATPase 477 661 - -
Pral1542g00002 1184 SUPERFAMILY HAD-like 476 826 IPR036412 -
Pral1542g00002 1184 Pfam haloacid dehalogenase-like hydrolase 478 706 - -
Pral1542g00002 1184 MobiDBLite consensus disorder prediction 839 853 - -
Pral1542g00002 1184 FunFam Cation-transporting ATPase 662 837 - -
Pral1542g00002 1184 Gene3D - 476 661 IPR023299 GO:0000166
Pral1542g00002 1184 CDD P-type_ATPase_cation 163 1099 IPR047820 -
Pral1542g00002 1184 MobiDBLite consensus disorder prediction 856 891 - -
Pral1542g00002 1184 SUPERFAMILY Calcium ATPase, transmembrane domain M 154 1161 IPR023298 -
Pral1542g00002 1184 NCBIfam P-type ATPase of unknown pump specificity (type V) 45 1141 IPR006544 GO:0006812|GO:0016020|GO:0019829|GO:0140358
Pral1542g00002 1184 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 487 671 IPR023299 GO:0000166
Pral1542g00002 1184 Coils Coil 888 908 - -
Pral1542g00002 1184 FunFam Cation-transporting ATPase 219 381 - -
Pral1542g00002 1184 MobiDBLite consensus disorder prediction 828 894 - -
Pral1542g00002 1184 SFLD C1.7: P-type atpase like 462 947 - -
Pral1542g00002 1184 ProSitePatterns Hypothetical cof family signature 2. 802 824 - -
Pral1542g00002 1184 Gene3D - 216 381 - -
Pral1542g00002 1184 SUPERFAMILY Calcium ATPase, transduction domain A 248 380 IPR008250 -
Pral1542g00002 1184 Gene3D - 662 834 IPR023214 -
Pral1542g00002 1184 PRINTS P-type cation-transporting ATPase superfamily signature 683 693 - -
Pral1542g00002 1184 PRINTS P-type cation-transporting ATPase superfamily signature 301 315 - -
Pral1542g00002 1184 PRINTS P-type cation-transporting ATPase superfamily signature 481 495 - -
Pral1542g00002 1184 PRINTS P-type cation-transporting ATPase superfamily signature 802 821 - -
Pral1542g00002 1184 Pfam E1-E2 ATPase 248 461 - -
Pral1542g00002 1184 ProSitePatterns E1-E2 ATPases phosphorylation site. 483 489 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1542g00002 Pral-Chr1542 6169 15811 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1542g00002 1 1184 Primary Pumps ATPases AT5G23630 77.787 0.0 1911
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1542g00002 K14950 - gmx:100789385 2074.29