Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1541g00006 ATGCTTTTGCAGAATCCCAGTGCGTGTTATAATCTCACTGTGAAAAACCCCAATCAAGTATGGAAAGCCAGTGATGTATATGGATCCGAACTTCCGAGTTTGGCCTTTCAAACGTGTTGGACCTTATTCGTCACTCGCATTTTCGTCATCATTGCCAGACCATTGCACATCCCCAGTCTTATTGCTGAAGTTATTGCTGGTTTCGTGCTCAGCACAGATTTATTGGGGGAGATACCGATAATGTTTCGCCTTCTTTTTCCCATTCGAGGGATCTTGAATGTTGAAGTGTTGAGCAGTTTAGGTATAATCTTCTACGCCTTCTTAACTGGCCTGCAGATGAACTTAGACAACGTCCTACGAGCACAAAAGAAGGCCTTTAGCATTGCCATATCTGGTGTTATCATTCCAATGGTAATGGCAGCGATCATATATACTCTGCATCGAAACACTTACGACGTTCAGACTGATGAAACCGTTGAAAGTGATCCACTTAAAGCTTGCCTGTTATGGTCAATATGTCTTACAGTCACGGGTTTTCCCTTGCTCACTGAAATCCTCGCCAGCCTCAAGCTCCTCTATACCGAGCTAGGAAGATCAGCCTTAGATGCAGCCATAGTCAGTGACTCTTTTTCTTGGCTTCTGTTTATGTTAGTGATTCCATTTATCCTTAGCGAAGGAGCTGGAGCAATCTACACTGTGATGGGTACCATAGCATTCATCACTTTATGCATTTTTGTGGTTCGTCCTGTCATTACTCCAATTATTGAACGAAAGACCGACCGGGAAGAATGGAATGATCATCAGCTACTGTTTGTGCTGATGGGAACTGTGATGTGTGCATATATTACAGACCTCCTTGGCTCTGGCATTGTTGGGGCTTTTGTGTTTGGATTGATTCTGCCTCATGGGAGATTTACTGGTCTGATGATGTCCGCATTAGATGATGTTGCTTCTGGTGTTCTAGCACCTCTGGTTTTTGCTGGCTCTGGCATGAGAATGGACTTGACAAAGGCCTTCTCTCACAGAAATTGGGCCTTTTCAGTGATGATTGTCGTGTTATTATGCACCCCAAAGATTCTCAGCACTTTGGTTGCTACTTTTGCTTATGGTATCCCTATTCGAGATGGTTTGGGACTCGGCGTGCTGATGAGCACCAAAGGCGTCATGGCTTTGATAATGCTTAACATTGGTTGGGACAGACAGATTTTGACGGTCTCATCCTATTCAATTCTAGTCACTGCTGTTGTTATAATGACTATAGCATCTTCAGTTGTCACCAACACTGCTTACAAACCAAGACATCAATTTAAGATGAATAAAATGAGAACCATACAAAATTCAAGACTTGACACAGAACTTCGAATTTTGGCTTGTGTGCATAACAACCGCCATGCTAGTAGCATGGTGAAGATCCTTGAATGCTTCCATGCCTCAAGAGTTTCCCCTCTCTATGTCGGTGCACTTTACCTTGTTGAACTTACGAGTCGTGGCGCTTTCGTGCTCCTTGACCACATGAGCCAACATGTTTCCCACACAGGAACACAGTACCATAGTCAATCACAAGCTGAGCTCGAAGGCATTACCAACACCTTCCAAGAATTAGCCGAGTCAAATGATGCCGTTCGAGTTGAAACATTCAATGTTCTATCAAGCTATAAAACCATTCATGAAGACATATACAACACAGCAAATGAAAAACACACTAATCTCATCCTCCTCCCTTTCCACAAGCAGGTCAACACAGAAGGCAGTCTAGAAATGCTGAATAGGGCGTACAAAGACATAAACTACAATGTCATGAAAGAACCACCTTGTTCAGTGGGGATCTTCATTGATCGAGGCGTATTCTCACTATCCAAAACGAATTGTCGTATTCTCATGATTTTCGTAGGTGGACCTGATGACCGTGAAGCCTTAGCTATTGCCTGGAGAATGGCAACTTATCCCGGAGTTTACCTCTCATTAGTGAGGATACTTCTAGTTGATGAAGCTTCATATCAGGTGGATAAAGAAGTTGCGTTGAAAGCCAAAGGGATATTGTCTATGGCTTTGGATAGTTCCAAGCAAAAAGAGCTGGATGATGAGTATGTGAACTTATTTAGACTCAAGGCAATGCACAATGAAGACTCCATAACTTACTCAGAGAAGGAAGTTTATGTGGGTGAGGATATTCCTGAATTACTAAATGAGTTAGACCAAGGTGATGATTATCATCTGTACATAGTGGGACAAGGCAAAGGGAGAAACTCTGTGTTATTCTCAGGTCTCATGGAATGGTGTGATTGCCCTGAGCTTGGAGCTATAGGAGACATATTGGCATCCAACAGTTTCGGGTCTAAATCCTCTGTGCTTATTGTGCAGCAATATGGATATGATGGAACCATGTCCGGAAATGCTGTTCAGAAACATCCAAATGATCAGGAAACAAAAGAAGATGGCTCTCATACGCTTATTAATCACGTCTGA 2466 0.4282 MLLQNPSACYNLTVKNPNQVWKASDVYGSELPSLAFQTCWTLFVTRIFVIIARPLHIPSLIAEVIAGFVLSTDLLGEIPIMFRLLFPIRGILNVEVLSSLGIIFYAFLTGLQMNLDNVLRAQKKAFSIAISGVIIPMVMAAIIYTLHRNTYDVQTDETVESDPLKACLLWSICLTVTGFPLLTEILASLKLLYTELGRSALDAAIVSDSFSWLLFMLVIPFILSEGAGAIYTVMGTIAFITLCIFVVRPVITPIIERKTDREEWNDHQLLFVLMGTVMCAYITDLLGSGIVGAFVFGLILPHGRFTGLMMSALDDVASGVLAPLVFAGSGMRMDLTKAFSHRNWAFSVMIVVLLCTPKILSTLVATFAYGIPIRDGLGLGVLMSTKGVMALIMLNIGWDRQILTVSSYSILVTAVVIMTIASSVVTNTAYKPRHQFKMNKMRTIQNSRLDTELRILACVHNNRHASSMVKILECFHASRVSPLYVGALYLVELTSRGAFVLLDHMSQHVSHTGTQYHSQSQAELEGITNTFQELAESNDAVRVETFNVLSSYKTIHEDIYNTANEKHTNLILLPFHKQVNTEGSLEMLNRAYKDINYNVMKEPPCSVGIFIDRGVFSLSKTNCRILMIFVGGPDDREALAIAWRMATYPGVYLSLVRILLVDEASYQVDKEVALKAKGILSMALDSSKQKELDDEYVNLFRLKAMHNEDSITYSEKEVYVGEDIPELLNELDQGDDYHLYIVGQGKGRNSVLFSGLMEWCDCPELGAIGDILASNSFGSKSSVLIVQQYGYDGTMSGNAVQKHPNDQETKEDGSHTLINHV 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1541g00006 821 PANTHER CATION/H + ANTIPORTER 25 789 - -
Pral1541g00006 821 Gene3D - 33 438 IPR038770 -
Pral1541g00006 821 MobiDBLite consensus disorder prediction 804 821 - -
Pral1541g00006 821 MobiDBLite consensus disorder prediction 796 821 - -
Pral1541g00006 821 Pfam Sodium/hydrogen exchanger family 42 422 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1541g00006 Pral-Chr1541 32375 35110 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1541g00006 9 789 Antiporter Super Family AT2G13620 35.516 3.09e-175 524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1541g00006 - K26731 pcin:129297839 1383.24