Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1541g00005 ATGCAAGCCAGAATTTGGCAGGCCGTTGCAACTCGTTTCATTTCTTCCTCTGCTCAATGGCATCTTAAATCCCCAGTTGTTCCTCTCGAAACTCAACGACTTTGCTCTTATTTGTCCATCTCTGAGGAGAAAGCAGAAACACCTTCGGAAGAAAAAAAGAAAGGAGAAGCCATGCTTGTCCGCAATCCCAATGTGTGTTATAATCTCACTGTGAAAAACGCCAATCAAGTATGGAAAACCAGTGATATCTATGGATCCGAACTTCCGATTCTGGCCGTGCAATTGTTTTGGACCATATTCGTCACTCGCATTTTCATCATCATCGCTAGACCCTTGCACCTCCCTAGTCTTGTTGCTGAAGTTATTGCTGGTTTCATGCTCAGCATGGATATACTAGGGCAAATACCGATAATGCTTCACCTTCTTTTTCCTGTTCGAGGGATTTTAGATGTTAACGTGATGAGCAGTTTAGGTTTAATCTTCTACGCCTTCTTAACTGGCCTGCAGATGAACTTAGACAACGTCCTACGAGCATCAAAGAAGGCCTTTAGCATTGCCGTGTCTGGTGTTGTCATTCCAATGGTAATGGGAGCGATCATATTTGCTCTGCATCGAAAAACTTACACCCTTCAGATTGATGAAACCATTGAAAATGATCCAGTTAAAGCTTGCTTGTTATGGTCAATATGTCTTACAGTCACGGGTTTTCCCTTGCTCGCTGAAATCCTCGCCAGCCTCAAGCTCCTCTATACCGAGCTAGGAAGATCAGCCTTAGATGCGGCCATAGTTAGTGACTCTTTTTCTTGGCTTCTGTTTATGTTAGTGATTCCATTTACCCTTAACCATGGAGCTGGAGCAATCTACACTGTTGTGGGTACCATAGCATTCATCACTTTCTGCATTGTTGTGGTACGTCCTGTCATTTCTCCAATTATTGATCAAAAAACCGACCGGGAAGAATGGAATGATCATCAGCTACTGTTTGTGCTGATGGGAACTGTGATGTGTGCATATATTACAGACATCCTAGGCTCTGGCATTGTTGGGGCTTTTGTGTTTGGATTGATTCTGCCTCATGGGAGATTCACTAATGTAATGATGTCTGCAGCAGATGATTTTGCTTCTGGCGTTCTAGCACCTCTGGTGTTTTTTGGTTCTGGAATGAGAATCGACTTGACAAGTGCTCTATCTCACAAAAATTGGACATTTTCAGTTATGGTTATTGTCTTATTATGCATCCCAAAGATTCTCAGCACTTTGATCGCTACTTTTGCTTATGGTATTCCTTTTCGAGATGGTTTGAGTCTTGGAGTGCTTATGAACACCAAAGGCGTCATGGCTCTGATCATGCTCAATATTGGTTGGGACAGAGAGATTTTGGCAATTTCATCCTATTCAATTCTAGTCACTGCTGTTGTGATAATGACTATAGCAACTTCAGTTATCACCAATATTGCTTACAGACCAAGAAAGCAATGTAAGATGAACAAAATGAGAACAGTACAAAATTCAAGACTTGATACAGAACTTCGAATTTTGGCCTGTGTGCATAACAATCGCCATGCCAGTAGCATGGTGAAGATCCTTGAATGCTTCCATGCCTCAGGAGTTTCCCCTCTCTATGTTGGTGCACTTTACCTTGTTGAGCTTACAAGTCGTGGCGCTTTCGTGCTTCTTGATCACATGAGCCAACATGTTTCTCCCCTAGGAACACAGTACCATAGTCAATCACAAGCTGAGCTCGAAGGCATAAACAACACCTTCCAAGAATTAGCCGGGTCAAATGATGCCGTTCAAGTTGAAACATTCAATATTCTATCAAGCTATAAAACCATTCATGAAGACATATGGAACACAGCAAATGAAAAACACACTAACCTTATCCTCCTCCCTTTTCACAAGCAGGTCAACACAGGAGGCTGTCTAGAAATGTTGAATAGTGCATACAAAGACATAAACTACAATATCATGCAAGAACCACCTTGTTCTGTGGGGATCTTCATTGATCGAGGCGTATTCCCACTATCCAAAACCACTTGTCGTATTCTCATGATCTTCGTCGGTGGACCCGATGATCGTGAAGCCTTAGCTGTTGCCTGGAGAATGGCAACTTATCCCGGCGTTCACCTCTCATTAGTGAGGATGCTATACCATACAGGTATGGAAGTTGAGTTGGAATCAAATCGGATATCATCCACAGTTCTGGATAGTTCCAAGCAAAAAAAGCTGGATGATGAGTATGTGGACTTATTTAGAATCAAGGCAATACACAATGAAGACTCCATAAGTTACTCAGAGAAGGAAGTTCATGTGGGTGAGGATATTCCCGAATTACTAAATGAGCTAGACCAAGGTGATTATCATCTTTACATAGTGGGACAAGGAAGAGGGAGGAACTGTGTGTTATTCTCAGGTCTCATGGAATGGTGTGATTGCCCTGAACTTGGAGCAATAGGGGACATATTGGCATCCAACAGTTTTGGTTCTAAATCTTCTGTGCTTATTGTGCAGCAATATGGATATGATGGAACTATTTCCGGAAATGCTGTTCAGAAACATCCAAATGATCAGGAAACAAAGGAAGATGGGTTCGGTACGCTTATTAATCATGTCTGA 2616 0.4216 MQARIWQAVATRFISSSAQWHLKSPVVPLETQRLCSYLSISEEKAETPSEEKKKGEAMLVRNPNVCYNLTVKNANQVWKTSDIYGSELPILAVQLFWTIFVTRIFIIIARPLHLPSLVAEVIAGFMLSMDILGQIPIMLHLLFPVRGILDVNVMSSLGLIFYAFLTGLQMNLDNVLRASKKAFSIAVSGVVIPMVMGAIIFALHRKTYTLQIDETIENDPVKACLLWSICLTVTGFPLLAEILASLKLLYTELGRSALDAAIVSDSFSWLLFMLVIPFTLNHGAGAIYTVVGTIAFITFCIVVVRPVISPIIDQKTDREEWNDHQLLFVLMGTVMCAYITDILGSGIVGAFVFGLILPHGRFTNVMMSAADDFASGVLAPLVFFGSGMRIDLTSALSHKNWTFSVMVIVLLCIPKILSTLIATFAYGIPFRDGLSLGVLMNTKGVMALIMLNIGWDREILAISSYSILVTAVVIMTIATSVITNIAYRPRKQCKMNKMRTVQNSRLDTELRILACVHNNRHASSMVKILECFHASGVSPLYVGALYLVELTSRGAFVLLDHMSQHVSPLGTQYHSQSQAELEGINNTFQELAGSNDAVQVETFNILSSYKTIHEDIWNTANEKHTNLILLPFHKQVNTGGCLEMLNSAYKDINYNIMQEPPCSVGIFIDRGVFPLSKTTCRILMIFVGGPDDREALAVAWRMATYPGVHLSLVRMLYHTGMEVELESNRISSTVLDSSKQKKLDDEYVDLFRIKAIHNEDSISYSEKEVHVGEDIPELLNELDQGDYHLYIVGQGRGRNCVLFSGLMEWCDCPELGAIGDILASNSFGSKSSVLIVQQYGYDGTISGNAVQKHPNDQETKEDGFGTLINHV 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1541g00005 871 PANTHER CATION/H + ANTIPORTER 66 839 - -
Pral1541g00005 871 Pfam Sodium/hydrogen exchanger family 98 482 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Pral1541g00005 871 Gene3D - 90 496 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1541g00005 Pral-Chr1541 27300 30192 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1541g00005 65 839 Antiporter Super Family AT2G13620 35.823 6.18e-173 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1541g00005 - K26731 pcin:129297839 1335.47