Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1541g00003 ATGGTTTGGAGAAATCTGGAGCAAATTAGACTCACGGCCAAAGAATTAGGGAATTTGGCATTCTCGCTTGTGAAAATCCCCTTTTCTCTTCATGTCACTGTTGCCTATGGCCCGAGCATGCTTCCGACAATAGGTCCGATGGCTACCTTTTTATTGGCCGAAAGGAACTCCCCACGTTTTGGTAAAGTTGAGCGCGGGGATATTGTCGTTGTGCAGTCACCTGAAAACCCTCAAAAGTTCATAGTCAAGCGCTTGCTTGGATTGCAGGGTGATAGTGTCACATTCCTTGTGGATCCTAAGAACAGTAATAAACGCAAGACTGTAGTGGTCCCCAAGGGACACGTTTGGCTAGGGGGAGATAACATATATAATTCCAGGGATTCAAGATATTTTGGTCCTGTTCCTTGTGATCTTCTTCATGCCAGGGTCTTCTGGAGGGTATGGCCACTTGGGGATTTTGGACCCATGGGTAAAAACTGA 480 0.4625 MVWRNLEQIRLTAKELGNLAFSLVKIPFSLHVTVAYGPSMLPTIGPMATFLLAERNSPRFGKVERGDIVVVQSPENPQKFIVKRLLGLQGDSVTFLVDPKNSNKRKTVVVPKGHVWLGGDNIYNSRDSRYFGPVPCDLLHARVFWRVWPLGDFGPMGKN 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1541g00003 159 Gene3D Umud Fragment, subunit A 27 154 - -
Pral1541g00003 159 FunFam Inner membrane protease subunit 1 27 155 - -
Pral1541g00003 159 SUPERFAMILY LexA/Signal peptidase 29 156 IPR036286 -
Pral1541g00003 159 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 29 158 - -
Pral1541g00003 159 CDD S26_SPase_I 32 143 IPR019533 GO:0004252|GO:0006465
Pral1541g00003 159 PRINTS Bacterial leader peptidase 1 (S26A) family signature 28 44 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pral1541g00003 159 PRINTS Bacterial leader peptidase 1 (S26A) family signature 81 93 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pral1541g00003 159 PRINTS Bacterial leader peptidase 1 (S26A) family signature 110 129 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pral1541g00003 159 Pfam Signal peptidase, peptidase S26 26 95 IPR019533 GO:0004252|GO:0006465
Pral1541g00003 159 Pfam Signal peptidase, peptidase S26 106 148 IPR019533 GO:0004252|GO:0006465
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1541g00003 Pral-Chr1541 9581 10911 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1541g00003 40 157 MADS-box Gene Family AT1G29960 55.085 9.70e-46 144