Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1539g00009 ATGCTGGGGTGTGTGCAAGTAATTGCTGGTTTTGCAGCACTTATCTTTCTCCTTTATCATTTTCATAGAAGCCGGTGTTGCAGAGACCCTCTCGTACCAGATTGGCCTCTATTGGGGATGTTGCCACATCTTCTCATAAATTTGCGGCAGATTCATGACTACGCAACACAAATTCTGCAAAGAAATGGTGGTACCGGTAGTTTCCTCGGACCTTGGTTTACTGGTATGAACTATTTGGCGACCTGCGACCCCATGAACGTACATCACATTTTGAGCAAGAATTTCAACAACTACATTAGAGGGCCCGAGTTTCGTGAGGATTTTGAAGCTTTTGGGGTTGGCGTTGTCACTGCAGATTCAGATACATGGAAATACCACAGGATACTCTCCCAGTCGTTGTTTAAAACCAGGAGTTTTCAGATGCTTATGGAGAAGAATGTTCGAAAGAAGGTGGAAACAAGTCTCCTTCCTCTTCTTGATCATGTTTTAAGGGAAGGGATTGAAGTGGACCTGCAAGACGTGTTCAATCGCTTCAACTTTGATGTTGTTTGCTCCAATATCTTAGGATATGAGCCAGAGAGCCTTGCCATTGATTTCCCCAGAGTTGCATGTGAGAGGGCTTTTACTGAAGCGGAGGAGTTTATATTCTATAGGCACACAGTACCTAAAAGCATTTGGAAGCTTCAGAGATGGCTTAAAATTGGATCAGAGAAGAAACTGGCCCTAGCATGTGAAGTTCTTGACGGATTCCTCTACGAAAGTATAGCATCAAAGAGAGAAAAGATCAGCAAAGAGAACGAAAAAGATAAAGAAAACGATGATGACTTGTTGACATGTATGATGAGGAAGGAAGAAGGAAAAGAACATGCGAATGACCAGTTTCTGAGAGACGCCACTTTTAATCTTTTTCTTGCAGGAAGAGACACTATATCCGCAGCTCTGAGTTGGTTCTTTTGGCTTCTTGCTAAACACCCTTCAGTAGAAGCGAAGATCCTTGAAGAGATCAAAGAAGAAAAGGAAGCACAGTATCAAGTATATCTCCACGCTGCTTTAAGCGAAGCTATGAGACTGTACCCTCCCGTACCTTTTGAGCGCAAGCAAGCAATCAAACACGACATACTTCCTAGTGGACACGAGGTTGGTCCTGGTTCTGTGATAATATTATCTTTATATGCAATGGGAAGATGTGAAGATGTATGGGGAAAAGACTGCTTGGAATTCAAACCAGAGAGGTGGATCTCAGAGAGAGGAAGCATTGTTCCTATACCGTCATATAAATTTATCAGCTTCAACTCAGGGCCAAGGAGTTGTCTGGGTAAGGACCTGTCCTTCATTCAAATGAAGATTATGGCTACTGATATCTTAAAGAATTATCATTTCCAAGTGGTGGGAGATCATCCTGTTTATCCCACACTTTCAATAATGCTTCTAATGAAGTATGGTCTCAAAGTTCGGGTCACTAAGAGAGATGGTCATATGATGGAAGAAGATGGAAATTAA 1500 0.422 MLGCVQVIAGFAALIFLLYHFHRSRCCRDPLVPDWPLLGMLPHLLINLRQIHDYATQILQRNGGTGSFLGPWFTGMNYLATCDPMNVHHILSKNFNNYIRGPEFREDFEAFGVGVVTADSDTWKYHRILSQSLFKTRSFQMLMEKNVRKKVETSLLPLLDHVLREGIEVDLQDVFNRFNFDVVCSNILGYEPESLAIDFPRVACERAFTEAEEFIFYRHTVPKSIWKLQRWLKIGSEKKLALACEVLDGFLYESIASKREKISKENEKDKENDDDLLTCMMRKEEGKEHANDQFLRDATFNLFLAGRDTISAALSWFFWLLAKHPSVEAKILEEIKEEKEAQYQVYLHAALSEAMRLYPPVPFERKQAIKHDILPSGHEVGPGSVIILSLYAMGRCEDVWGKDCLEFKPERWISERGSIVPIPSYKFISFNSGPRSCLGKDLSFIQMKIMATDILKNYHFQVVGDHPVYPTLSIMLLMKYGLKVRVTKRDGHMMEEDGN 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1539g00009 499 Gene3D Cytochrome P450 19 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00009 499 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00009 499 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00009 499 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00009 499 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00009 499 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00009 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Pral1539g00009 499 Pfam Cytochrome P450 34 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00009 499 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00009 499 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00009 499 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00009 499 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00009 499 PANTHER CYTOCHROME P450 24 483 - -
Pral1539g00009 499 SUPERFAMILY Cytochrome P450 19 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00009 499 CDD CYP86A 68 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1539g00009 Pral-Chr1539 61488 62987 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1539g00009 12 489 Cytochrome P450 AT4G32170 44.715 9.91e-150 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1539g00009 - - pcin:129305260 668.692